Butyricimonas faecihominis: F1611_13145
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Entry
F1611_13145 CDS
T09480
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfh
Butyricimonas faecihominis
Pathway
bfh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F1611_13145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfh03021
]
F1611_13145
Transcription machinery [BR:
bfh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F1611_13145
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
Sigma70_ECF
HTH_23
HTH_28
HTH_10
KORA
DUF134
HTH_3
CAAP1
HTH_26
HTH_24
DUF1492
HTH_40
Cytadherence_Hmw2
DUF2774
TnsD
Terminase_5
HTH_Tnp_1
DUF7646
Mycobacteriophage_Gp53
Xre-like-HTH
Trp_repressor
HTH_7
Motif
Other DBs
NCBI-ProteinID:
WOF09262
LinkDB
All DBs
Position
complement(3203555..3204139)
Genome browser
AA seq
194 aa
AA seq
DB search
MREIDQRICELLRVRKIEGMELLFKEYYKPLVVWGATFVSDVQRSEDIVQDFFVKLWEKS
LTDKLFPDSLKSYLFASVRNLALNQLERLDPLKQACDIAYYESPWEEYDNFEEEVFQRVE
VELKKLPPRTQEIIRCVYLKGMKYKEVAEKLGISVATVNSLLVKALKKLRQQSDNESELA
VYLFFLEKRLFSSK
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatagatcaacgaatttgtgaattgttgagggttcggaaaatagaggggatg
gagcttctttttaaagagtactacaaaccattggtggtttggggtgctacttttgtgtct
gatgttcaacgttcagaagatatcgtgcaggatttttttgtcaaattgtgggaaaagtca
ttgacggataaattattcccggattcgttgaaatcttacttgtttgcttctgtgcgcaat
ttggcgttaaaccaattggaacggttagatccgttaaaacaagcttgtgatatagcgtat
tacgagagtccatgggaagaatatgataactttgaagaagaagtgtttcagcgagtggaa
gtggaactaaaaaaattaccacctagaacgcaagagatcattcgttgtgtctatttaaag
ggaatgaaatataaagaggtggcggaaaaactaggaatttcagttgcgacggtcaattct
cttttggtaaaagcattaaaaaaattacgacaacaatctgataatgagagtgaacttgca
gtttatttattttttcttgaaaaaagattgttttccagtaaatga
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