Butyricimonas faecihominis: F1611_14825
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Entry
F1611_14825 CDS
T09480
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bfh
Butyricimonas faecihominis
Brite
KEGG Orthology (KO) [BR:
bfh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfh03032
]
F1611_14825 (topA)
03400 DNA repair and recombination proteins [BR:
bfh03400
]
F1611_14825 (topA)
Enzymes [BR:
bfh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F1611_14825 (topA)
DNA replication proteins [BR:
bfh03032
]
Prokaryotic type
DNA Topoisomerases
F1611_14825 (topA)
DNA repair and recombination proteins [BR:
bfh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F1611_14825 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WOF09558
LinkDB
All DBs
Position
3601581..3603941
Genome browser
AA seq
786 aa
AA seq
DB search
MIENLVIVESPAKAKTIERFLGENYVVKSSFGHIRDLEKKDLGIDIEHNFQPKYEISPDK
KAIVKELKQLAKEAKTVWLASDEDREGEAIAWHLFEVLGLKKENTKRIVFHEITKDAILH
AINNPRDIDKNLVDAQQARRVLDRLVGFEVSPVLWKKVKPSLSAGRVQSVAVKLIVERER
EINHFVEQKYYKVTGTFETKDANGNSVPLKAELSERFSTQEETVNFLEHCKKAAFSVSNV
ETKPGSRKPAPPFTTSTLQQEASRKLGFSVSQTMAVAQKLYEQGHITYMRTDSVNLSQLA
IGAAKAVICNTLGEKYSKPRNFATKTKGAQEAHEAIRPTYMDKESISGDKNEQQLYSLIR
KRTLASQMAEAELEKTTITIAITGEKHTFEAVGEVIIFDGFLKVYMESFDDEKEDDEAAL
LPAIHKGDQLQRSLIQALEQYTTHPPRYTEASLVKKMEALGIGRPSTYAPTITTIQNRGY
ILRESRDGTERQLDQIDLKGQDIKVKKISRIFGAEKKKLFPSDIGMVVTDFLSNYFTNIM
DYNFTANAEDALDHIAEGEVEWQSMIGTFYQPFHANVEKTLKESERNTGARELGKDPQTG
ETVSVRIGRFGPMAQIGEGESVRYAGLLKGQLMETITLEEALDLFKFPRQLGEFEEKPVS
VGIGRFGPYIKHNQLFVSLKKGVDDPGTITLETAIERINEKREIEKNRKIQEFENGVQIL
NGRFGPYITFNKVNYKIPKGKEADKLTFEETMEIIAKGGDSKKKTTKKTTKKAAPKATKK
ETKKKE
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaatttagtaattgtcgagtctccggctaaagccaagactattgaacgtttt
ttaggagagaattatgttgtaaaatctagtttcggacatatccgggatcttgaaaaaaaa
gatttaggaattgatatagaacataatttccaaccaaaatatgaaatatcacccgacaag
aaagcgattgtaaaagaattgaaacaacttgccaaggaagccaaaacggtttggttagcc
tccgatgaggaccgcgagggagaagctattgcttggcatttattcgaagttctggggttg
aagaaggagaacacgaaacggattgtttttcacgaaatcacgaaagatgctattttacat
gcgatcaataacccccgggacattgataaaaacctcgtggatgcccaacaggcccgccgg
gttcttgaccgactggtcggattcgaagtgtcaccagtcctatggaaaaaagtgaaacct
tccttgtcagccggacgggttcaatccgttgccgtaaaactcatcgttgaacgagaacga
gaaattaaccatttcgttgaacaaaaatattataaggttaccggaacatttgaaaccaaa
gacgcaaatggtaattcggtacccttaaaggcagaattatccgaacgtttttccacgcag
gaagagacggttaactttctggaacattgcaagaaggcggcattttcagtaagtaatgtc
gagacgaaaccgggtagccgtaaaccggctccaccgttcacgacatccacgctacaacag
gaggcatcccgcaaattgggattttctgtttcgcagacaatggccgtggcccagaaacta
tacgaacagggacacatcacttacatgagaacggactccgtgaacctatcccaactggct
atcggtgcggcaaaagccgttatctgtaacacgctgggagaaaaatattccaaacctagg
aatttcgccacgaagacgaaaggggcgcaagaggcccacgaggccatccgcccgacctat
atggacaaggaatcgatcagcggagacaagaatgaacagcaactttactcgttaatccgg
aaacggactctcgcctctcaaatggcagaggccgaactggaaaaaacaaccataacgatc
gccattaccggggaaaaacacacgttcgaagccgtgggtgaagtgatcattttcgatggt
ttcctcaaagtgtacatggaatctttcgatgacgagaaagaagacgatgaagcggcctta
ttacctgcaatacataaaggagaccagttacaacgttccctgatccaagccttagaacaa
tacacgacgcatcctccccgctacacggaggccagtctcgtgaagaaaatggaagccttg
ggaatcggacgtccgtcaacatacgcacccacgattaccacgatccagaaccggggatat
atcttacgggaaagccgggatggtacagaacgtcaactagaccagatagaccttaaagga
caagatataaaagtcaagaagatcagccggatattcggtgcggaaaagaagaaattgttt
ccctcggatatcggaatggtcgtgacagatttcctttccaattatttcacgaatatcatg
gattataacttcacggcaaatgccgaggatgcccttgaccacattgccgaaggagaggtt
gaatggcaatccatgatcggaacattctatcaacctttccatgctaacgtggagaaaacg
ttgaaagaatccgaacggaacacgggagcccgggaacttggtaaagatccacaaacagga
gaaaccgtttccgtacgaatcggacgttttggaccgatggctcagattggtgaaggagaa
tccgtacgttatgccggactgctcaaagggcaactgatggaaaccattaccttggaagaa
gctttagacttgttcaagtttccccgtcaactgggtgaattcgaggagaaacctgtcagt
gtcggcatcggtcgttttggaccttacatcaagcataatcaacttttcgtttccttgaaa
aaaggcgttgacgatccgggaacaataactcttgaaaccgctatcgaacgaatcaacgag
aaacgagaaatcgagaaaaacaggaagatccaagagtttgaaaatggggtacaaattctt
aacggtcgttttgggccttacatcacgttcaacaaagtgaactataagatccccaaagga
aaagaagcagacaaattaacctttgaggaaaccatggaaatcattgcaaagggaggggac
agtaagaaaaaaacgacaaaaaagacaacaaaaaaagcggccccgaaggcaacaaaaaag
gaaacgaaaaagaaggaatag
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