Butyricimonas faecihominis: F1611_16220
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Entry
F1611_16220 CDS
T09480
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfh
Butyricimonas faecihominis
Pathway
bfh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F1611_16220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfh03021
]
F1611_16220
Transcription machinery [BR:
bfh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F1611_16220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
Sigma70_r2
HTH_23
HTH_24
GerE
HTH_28
HTH_Mga
HTH_7
HTH_Tnp_4
HTH_VMAP-M9
Trp_repressor
Motif
Other DBs
NCBI-ProteinID:
WOF10719
LinkDB
All DBs
Position
complement(3941513..3942094)
Genome browser
AA seq
193 aa
AA seq
DB search
MNDSEKNRNQEICNLLRSGNQKGMELLFDAYYKPLVVWADTFLRDVNMAEDVVQDFFFSI
WNNKVYLNFFPSTLASLLYVSVRNRCLNRMDKQDVFHHAVDLDHVDLAFEEYNENHDAIV
SKVLDEIALLPERSRDVVNGVFVEGLKYREVAERYGISVSTVKTLLGLSVKKLRERLNEE
LFAGFLLFFCTRK
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgattctgagaaaaataggaatcaagaaatatgtaatttacttcgttccggaaat
caaaaggggatggagttgttatttgatgcctattataaacccttggtcgtgtgggctgat
acgtttttacgggacgtgaacatggcagaagatgtcgtgcaggattttttcttttccatt
tggaataataaagtttacttgaatttcttcccttctactttggcctctttgctttacgtg
tctgtgcgtaaccgttgtctgaaccggatggataagcaagatgtttttcatcatgctgtg
gacttggaccacgtggatttagctttcgaagagtataatgagaatcatgacgccatcgtg
tcgaaggtgttggacgagattgcgttattacccgaaagaagtcgggatgtcgtgaacggg
gtgtttgtcgagggattgaaataccgggaagtggccgagcgttacgggatctcagtttcc
acggtaaaaacattgctgggtctctcggttaagaaattgagagagcgattgaatgaggag
ttattcgcaggattcctgttatttttctgtactcgaaaataa
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