Butyrivibrio fibrisolvens: CIY_03770
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Entry
CIY_03770 CDS
T02581
Name
(GenBank) uncharacterized domain HDIG
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bfi
Butyrivibrio fibrisolvens
Brite
KEGG Orthology (KO) [BR:
bfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfi03019
]
CIY_03770
Messenger RNA biogenesis [BR:
bfi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CIY_03770
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
CBK73327
LinkDB
All DBs
Position
complement(319550..320512)
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AA seq
320 aa
AA seq
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MENYMKYINTLKEGDRGTETYLCKKKTQGISKTGKAFESLTLCDKTGTIDAKIWDVDSEG
ISDYDELDFVTVTGDITSWNGALQFNIKRLRKANEGEFDIADYIPSSKKDIGVMWNDLMS
LINSIKTPYFKALLRKYFVEDKEFIETFKSHSAAKSVHHGFTGGLLEHTLSVATNCDYFS
KQYPFLDRDLLITAAIFHDIGKVKELSEFPRNDYTDEGQLLGHIYVGATMIDRAIDDIEG
FPAVKRKELIHCILSHHGELEFGSPKKPAIAEAIALSFADNIDAKLETIYEALENVEENN
LTWQGFNRLLDSNIRRTGKN
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggagaattacatgaaatacattaacaccctcaaagagggagacagaggtacagaaaca
tacctttgcaagaagaagactcagggcatttcaaagacaggaaaggcttttgaatcactg
acattatgcgataagacaggcaccattgatgcaaagatttgggatgtagattccgagggc
atcagcgactatgatgagttggatttcgttacagttacaggcgatatcactagctggaat
ggtgcgctacagtttaatataaagcgccttcgcaaggccaatgagggcgagtttgatatt
gcagattatatcccttccagcaagaaggatatcggggttatgtggaatgacttaatgtcg
cttatcaattccatcaagactccatattttaaggcattacttagaaaatattttgttgaa
gataaagaatttatcgagacattcaagtctcattcagctgcaaaatcagttcatcacggt
tttacaggtggacttttagagcacactctttcagtagctacaaactgcgattactttagc
aagcagtacccatttttagatagagatttgcttatcacagcagccattttccacgacatt
ggaaaggttaaggagctttcagagttcccacgaaatgattacacagatgaggggcagctt
ctcggtcacatctacgtaggggctactatgattgacagagctatcgatgatatcgaaggt
ttcccagctgtaaagcgcaaggagcttatccactgtatcctttcacatcacggggagctg
gagtttggttcaccaaagaagccagctatcgcagaggctattgcgctttcatttgcggac
aacatcgatgcaaagcttgagactatttatgaagctcttgaaaatgttgaggagaataat
ttgacttggcagggatttaaccgtctgcttgattcaaacatccgtagaacaggaaagaat
taa
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