Butyrivibrio fibrisolvens: CIY_05720
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Entry
CIY_05720 CDS
T02581
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
bfi
Butyrivibrio fibrisolvens
Pathway
bfi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CIY_05720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfi03400
]
CIY_05720
DNA repair and recombination proteins [BR:
bfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CIY_05720
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CIY_05720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
SWI2_SNF2
NAGLU_C
Microtub_bd
Focal_AT
DUF87
MrpR_N_CB
FlaG
Motif
Other DBs
NCBI-ProteinID:
CBK73496
LinkDB
All DBs
Position
complement(506081..508078)
Genome browser
AA seq
665 aa
AA seq
DB search
MNSGVDMDFKLHSEYKPTGDQPQAIEDLVRGFKEGNQMQTLLGVTGSGKTFTMANVIEKL
NKPTLIIAHNKTLAGQLYSEFKEFFPENAVEYFVSYYDYYQPEAYVPSTDTYIAKDSSIN
DEIDKLRLSATASLSERRDVIIVSSVSCIYGIGEPDDFQNMMVSLRPGDFKDRDDVIHEL
INIQYMRNDMDFDRGTFRVRGDVLEVIPANVSDYGIRIEFFGDEIDRICETDIMTGQVKR
ELEHVAIFPASHYVIPQDKINSACASIEAELEERVKFFKSEDKLIEAQRIAERTNFDIEM
LRETGFCSGIENYSRHMTNQQPGEPPKCLIDYFDDDFLIIIDESHITLPQIRGMFAGDQA
RKRTLVEYGFRLPSALDNRPLNFGEFESKIDQIMFVSATPGDYEEEHEMLRTEQVIRPTG
LLDPEVEVRPVEGQIDDLFNEIKKETAKKNKVMITTLTKRMAEDLTDYLAELGVRVKYMH
SDIDTMERAEIIRDLRLDVFDVLVGINLLREGLDIPEITLVAILDADKEGFLRSERSLIQ
TIGRAARNSEGHVIMYADTMTESMEKAISETERRREIQMAYNEAHGITPKTIQKSVRELI
SISKDIAKKEMQFKKDPEEMNKQELEKLIEDIQKKMKKAASELNFEAAAEYRDKMVELKN
MLREL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaggtgttgatatggattttaaattacattcagaatacaaaccaactggggat
cagccccaggcaatagaggatttggtcagaggtttcaaagaaggaaatcagatgcagacg
cttcttggtgttacgggctctggaaagaccttcaccatggccaatgtcattgaaaagctg
aacaagcctacacttattattgcccataataagacgctggcaggtcagctttattccgag
ttcaaggaatttttcccagagaatgcagttgaatattttgtatcctactacgattattat
caacctgaggcatacgtgcctagcactgatacctacatcgctaaggattcttctattaat
gacgagattgataagctgcgtctttcggccacagcatcattgtcagagcgcagggatgtt
atcatcgtctcatctgtttcctgcatctatggtattggtgagccggatgatttccagaat
atgatggtttcccttcgtccaggagattttaaggacagagatgatgttattcacgaactc
attaatatccagtacatgcgtaatgatatggattttgacagaggtaccttccgtgtccgt
ggagatgtgctggaggttattcctgccaatgtcagcgattatggaatacgcatagagttt
ttcggagacgagatagaccgtatatgcgaaactgatattatgacgggacaggtaaagcga
gagttggagcatgttgccattttccctgccagccattacgttatccctcaggacaagatt
aactcagcctgtgccagtatcgaggcagagctggaggagagggtaaagttcttcaaatca
gaggacaagcttatagaggctcagcgtatagcagagcgcactaactttgatatagagatg
ctgcgagaaacaggcttctgctccggcatagaaaattatagtaggcacatgactaatcag
cagccaggggagccgccaaaatgcctgatcgattattttgatgatgatttccttattatc
atagacgagagtcatatcactcttcctcagattaggggtatgtttgcaggtgaccaggct
agaaagcgcactcttgtggagtatggctttagattgccttcggctttggataaccgtcca
ctaaatttcggcgagttcgaatcgaaaatcgaccagattatgtttgtatctgctactcct
ggagactatgaggaagagcacgaaatgcttcgcacagagcaggttatccgccctacaggc
ttgcttgatccagaggtggaggttcgtcctgtagaaggccagattgatgatttgttcaac
gagataaagaaagagactgcaaagaaaaataaggttatgataaccacccttaccaagcgt
atggcagaggatttaacagattatctggcagagcttggcgtcagggtaaaatatatgcat
tcggatatcgatacaatggagcgcgcagaaatcatccgtgacttgcgtttggatgttttt
gatgtacttgttggaatcaatcttcttcgagaaggtcttgatattccagaaatcactctg
gttgctattttggatgcagataaggaaggcttccttcgcagcgagcgctcccttattcag
accatcggtcgtgctgctagaaatagcgagggacacgttattatgtatgccgatactatg
acagagtctatggagaaggctatctccgagacggagcgtcgtcgtgagattcagatggca
tacaatgaggcccatggtatcactccaaagacaatccagaaatcagttcgcgagcttatt
tctatttctaaggatattgcaaagaaggaaatgcagttcaagaaggatcctgaagaaatg
aacaagcaggagcttgaaaagctaattgaggatattcaaaagaagatgaagaaggctgct
tcagagcttaatttcgaagccgccgcagaatatcgtgacaagatggttgaacttaaaaac
atgttgagggaattatga
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