Butyrivibrio fibrisolvens: CIY_07950
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Entry
CIY_07950 CDS
T02581
Name
(GenBank) Superfamily I DNA and RNA helicases
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bfi
Butyrivibrio fibrisolvens
Pathway
bfi03420
Nucleotide excision repair
bfi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CIY_07950
03430 Mismatch repair
CIY_07950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfi03400
]
CIY_07950
Enzymes [BR:
bfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CIY_07950
DNA repair and recombination proteins [BR:
bfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CIY_07950
MMR (mismatch excision repair)
Other MMR factors
CIY_07950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
Vp24_capsid
CxC5
DUF6364
Motif
Other DBs
NCBI-ProteinID:
CBK73685
LinkDB
All DBs
Position
730590..732995
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AA seq
801 aa
AA seq
DB search
MNLDFLNDRQREGVVTTEGPVLILAGAGSGKTRVLTHRVAYLIEQGVMPYNIMAITFTNK
AAREMRERIDNIVGFGSDGVWVATFHASCVRILRRFCENLGQGYSSNFTIYDTDDCKTLM
KEVCKYLQIDTKQFKERTFLNVISDAKNKLIGPEEFTNRAMGDFNMSRQATVYREYQARL
RQNNAFDFDDLIMKTVELLRLDGDVRAYYNDKFKYIMVDEYQDTNAAQFELVRLLTGGAQ
NLCVVGDDDQSIYKFRGADIYNILNFEQHFPAAHVIKLEQNYRSTGNILEAANAVIANNE
GRKEKALWTEAEDGDKIQFQQFDSAYEEASFIASNIGALVRKGEADYKDCAVLYRTNAQS
RLIEEKMIYEGIPYKIVGGVNFYSRKEIKDVLAYLKTVDNGSDDIAVQRIINIPKRGIGA
TTITKVSDFARENGLNFYEALLHCEDVPSIGKAATKIQGFTSLIEKLRKIAKEESVSALV
EEILEQTDYVAELRAEGTDEAKARIENIDELLTKAVAYEKDARDDGEEPTLSGFLEDVAL
VADIDSYEESDNYVVLMTLHGAKGLEFPRVYMAGMEDGLFPGQAAIFDGGGADSELEEER
RLAYVGITRAREHLTMTAARMRMVRGETAFHKISRFVKEIPEELVKGNLWEPKPMDDYSS
TPIGEYSVYQKPSGFGKPFAASTSYGTAGSTAGSGKGSYSASRYSVGSSTTAVANKNGTK
IEKGELDYGIGDRVSHIKFKEGTVKDIIDEGRDYEVTVEFDGVGVKKMFASFAKLKRYRK
PSPFRGRGTALAVDEVLYETW
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagattttttgaatgacaggcaacgagagggcgtagtcactacagagggacca
gtgcttattttagctggtgcaggctccggaaagactagagtgctcacccatcgcgttgct
tatttaatagagcagggagttatgccatacaatattatggccatcaccttcaccaataag
gctgccagagagatgagggagcgtattgataatatagtaggctttggttcggatggcgta
tgggtagccacattccatgccagctgtgtacgtatcttgcgcagattctgtgagaatctt
ggtcagggctacagcagcaatttcaccatttacgatacagacgattgcaagactcttatg
aaggaggtttgcaaatatcttcagatagacacaaagcagtttaaagagcgtacattttta
aacgttatttctgatgcaaagaataaactcatcggtccagaggaattcactaatcgtgcc
atgggtgattttaatatgtcccgtcaggccactgtttatcgtgaatatcaggctcgcctt
cgtcagaataatgcttttgattttgatgatttgattatgaagactgtagagcttcttcgt
ttggatggagatgttcgtgcctattacaatgataaatttaaatacatcatggtggacgag
tatcaggataccaatgcagctcagtttgagctggttcgtttgcttacaggtggggcacag
aacctttgcgtagtaggtgatgacgatcagtctatctacaagttccgtggtgcagatatt
tataacattttgaattttgagcagcatttcccagcagcccatgttataaagctggagcag
aattatcgtagcacagggaacattctggaggctgctaatgcagtcatcgcaaacaatgaa
ggacgtaaggaaaaggccctttggacagaggctgaggatggagacaaaatccagttccag
cagtttgatagtgcctacgaggaagccagctttatcgccagcaatattggcgcacttgtt
cgtaaaggcgaggcagattataaggactgcgcggtgctttatcgtaccaatgcccagtca
cgtcttatagaagaaaaaatgatttacgagggcatcccttacaagattgtgggcggtgtt
aatttctacagccgcaaggaaatcaaggatgtacttgcttatttaaagactgttgataat
ggcagtgatgacatagccgttcagcgtatcatcaatattccaaagcgcggaataggtgct
actactatcacaaaggtttctgattttgccagagaaaatggactgaatttctacgaggcc
ctgcttcactgtgaggatgttccttcaattggaaaggctgccacaaagattcagggattt
accagccttattgaaaagctacgcaagattgcaaaggaagaatcagtatcagctcttgta
gaggagattttagaacagacagattacgtggcagagcttagggcagagggcacagatgag
gccaaagcccgtattgaaaatatcgacgagttacttactaaggcagttgcttacgaaaag
gatgccagggatgatggcgaggagcctactctttcaggattcttggaagatgtggcactt
gtagcagatatagatagctatgaggaaagtgataattacgtggtgcttatgacacttcac
ggagctaagggtctggagttcccacgtgtttatatggcaggtatggaggatggactcttc
ccaggacaggccgctatttttgatggtggcggagccgattctgagctggaagaggagcga
cgtcttgcgtatgtaggaattactcgtgccagggagcatcttacaatgactgctgccaga
atgcgtatggttcgcggagagacagctttccacaagatttctcgatttgtaaaggagatt
cctgaggaacttgtaaagggcaatctttgggagccaaagccaatggatgattacagcagc
acacctattggagaatattctgtctatcagaagccatcaggctttggaaagccatttgct
gcatctaccagctatggcacagctggctctacagcaggttctggaaagggtagctatagt
gccagcagatattctgtgggcagctctaccacagcagttgctaataaaaatggcacaaag
atagaaaaaggtgaattagattatggcattggcgaccgtgtcagccatatcaaatttaaa
gaaggaacagtaaaggatatcattgacgagggccgcgattatgaggttacggtggagttt
gatggtgtcggtgtgaagaagatgtttgcatcctttgcgaagttaaaaagatatagaaag
ccttccccttttaggggaagggggaccgctttagcggtggatgaggtattatatgaaacg
tggtga
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