Bacteroides finegoldii: BFINE_11270
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Entry
BFINE_11270 CDS
T09648
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bfin
Bacteroides finegoldii
Brite
KEGG Orthology (KO) [BR:
bfin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfin03016
]
BFINE_11270 (truB)
Enzymes [BR:
bfin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BFINE_11270 (truB)
Transfer RNA biogenesis [BR:
bfin03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BFINE_11270 (truB)
Prokaryotic type
BFINE_11270 (truB)
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
RNA_polI_A14
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BDW75332
LinkDB
All DBs
Position
complement(971872..972594)
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AA seq
240 aa
AA seq
DB search
MNFKKGEVLFFNKPLGWTSFKVVGHARYHICRRIGVKKLKVGHAGTLDPLATGVMIVCTG
KATKRIEEFQYHTKEYIATLRLGATTPSYDLEHEIDATYSTEHITREMVEEVLTHFIGTI
EQVPPAFSACMVDGKRAYELARKGEEVELKAKQLVIDEIELLECCLETPEPMIRIRVVCS
KGTYIRALARDIGEALHSGAHLTGLIRTRVGDVRLEDCLDPEHFKEWIDRQEIENEEENN
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaaaaaaggagaagtactgttttttaataaacctcttgggtggacttcattt
aaagtagtgggacatgcccgctatcatatctgtcgccggataggagtgaaaaaactgaaa
gtcggacacgctggtacgctggatcctcttgcaacgggggtgatgatagtatgtacgggt
aaggccacgaagcggatagaagagtttcaatatcatacgaaggagtatatcgccacgctc
cgactgggggctactacgccgtcgtacgatttggaacacgagatagatgctacctactct
accgaacatatcacacgggagatggtggaagaagtgttgacacattttataggtacgata
gaacaggttcctcctgccttctccgcctgcatggtggatggaaaacgtgcttatgagttg
gcacggaaaggcgaggaagtcgaactaaaggcgaagcagcttgttatcgacgagattgaa
ttgctggaatgctgtctggaaacaccggaaccgatgattcggattcgtgtggtatgcagc
aagggaacgtatatccgtgcgttggcacgcgacattggcgaagcactccacagcggagcg
catctgacgggcttgattcgtacacgtgtgggcgatgtccgtctggaagactgtctggac
cctgaacactttaaagagtggatagaccggcaggaaatagaaaatgaggaagaaaataat
taa
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integrated database retrieval system
