Bacteroides finegoldii: BFINE_14980
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Entry
BFINE_14980 CDS
T09648
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bfin
Bacteroides finegoldii
Brite
KEGG Orthology (KO) [BR:
bfin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfin03032
]
BFINE_14980
03400 DNA repair and recombination proteins [BR:
bfin03400
]
BFINE_14980
Enzymes [BR:
bfin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BFINE_14980
DNA replication proteins [BR:
bfin03032
]
Prokaryotic type
DNA Topoisomerases
BFINE_14980
DNA repair and recombination proteins [BR:
bfin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BFINE_14980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Motif
Other DBs
NCBI-ProteinID:
BDW75703
LinkDB
All DBs
Position
complement(1320342..1322072)
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AA seq
576 aa
AA seq
DB search
MEMKAELTRRIKTKEEARAFLEACQGATFTIEDITTRPVKKTPPAPFTTSTLQQEAARKL
GYTVAQTMMLAQRLYESGFITYMRTDSVNLSDFATIGSKEAITKMMGENYVHPRHFETKT
KGAQEAHEAIRPTYMENQSIEGSAQEKKLYDLIWKRTIASQMADAELEKTTATISISGNK
DVFTATGEVIKFDGFLHVYRESYDDDNEQEDESRLLPPLKKGQRLEYGPIIATERFTQRP
PRYTEASLVRKLEELGIGRPSTYAPTISTIQQREYVEKGNKDGEERLFNVLTLRENQIKD
ENHTEITGAEKAKLFPTDTGIVVNDFLTEYFPNILDYNFTASVEKEFDEIAEGEAQWTSI
MKTFYDKFHPSVENTLAIKTEHKVGERILGEDPVSGKPVSVKIGRFGPVAQIGTADDEEK
PRFAQMKKGQSMETITLEEALELFKLPRTLGEYEGKTVSVGVGRFGPYVLHNKVYVSLPK
AADPMTITLEEAEQLILEKRQKEMERHLKKFEEEPELEILNGRYGPYITYKGSNYKIPKD
IVPQDLTLKSCLELIKVQNEKEPGTTKKRKTTPKKK
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
gtggagatgaaagcggaactgacacgtcgcatcaagacgaaggaagaagcaagagctttc
ctcgaagcttgtcagggagccacttttacaatcgaagatatcactacccgtccggtaaag
aaaacacctcctgcaccgttcaccacttctacgttgcaacaggaagcagcacgtaaattg
ggatataccgttgcgcagaccatgatgcttgcacaacgcctgtacgaatcgggatttatc
acttatatgcgtacggactctgtcaacctctcggattttgcaacaataggaagcaaagag
gctatcactaaaatgatgggagaaaactacgtacatccccgtcacttcgagacaaagacc
aaaggtgcacaggaagctcatgaggctatccgccccacctatatggaaaaccaatccatc
gaagggtcagcgcaggaaaaaaaattgtacgacttgatatggaaacgcaccatcgcttcc
cagatggcagacgcggagctggaaaagacaactgctacaatcagcataagcggtaacaaa
gatgtattcacagctaccggcgaagtgatcaagttcgacggattcctgcatgtataccgt
gagtcctacgatgatgacaatgaacaggaagatgaaagccgcttattacctcctttgaaa
aaaggccagcgactggaatacggccctatcatcgcaaccgaacggttcactcaacgcccg
ccacgctacacggaagcaagtcttgtgcgcaaactggaagaattgggtatcggacgtccg
tctacgtacgctccgacaatttccactatccaacaacgcgaatatgtagagaaaggaaac
aaagatggggaagaacgcctgttcaacgtattaaccctgagagaaaatcagattaaagac
gaaaatcatactgaaataaccggtgcggaaaaagcgaaattatttcctacggacacaggt
atcgtagtcaatgatttcctcactgaatatttcccgaacattctggattacaacttcaca
gccagtgtagaaaaggaatttgacgaaattgcagaaggagaagcgcaatggacttccatc
atgaaaacgttttatgataagttccacccatctgtagaaaacactctggctatcaagact
gaacataaggtaggagaacgcatattgggagaagatccggtaagtggcaaacctgtttca
gttaagattggacgtttcggtcctgtcgcacagatcggcacggcagatgatgaagaaaag
cctcgctttgcacaaatgaagaaagggcaatctatggaaaccatcacattggaagaggca
ctggaattgttcaaattaccccgtacattaggcgaatacgaaggaaaaacagtaagtgtg
ggtgtggggcgtttcggtccttatgttttacataacaaggtatatgtatctctgccgaaa
gctgccgatccgatgaccatcactttggaagaagcggagcaactaattctggaaaaacgc
cagaaggagatggaacgtcacctcaagaagtttgaagaagaaccggaacttgaaattctg
aacggacgttacggaccttatatcacttacaaaggttccaactataagattcccaaagat
attgttccacaggatttgacattgaagagttgcttggaactaatcaaggtacagaacgaa
aaagaacctggtacaaccaagaaaaggaaaacgactccaaagaaaaaataa
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