Bacteroides finegoldii: BFINE_16450
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Entry
BFINE_16450 CDS
T09648
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bfin
Bacteroides finegoldii
Pathway
bfin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BFINE_16450 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfin03019
]
BFINE_16450 (pnp)
03016 Transfer RNA biogenesis [BR:
bfin03016
]
BFINE_16450 (pnp)
Enzymes [BR:
bfin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BFINE_16450 (pnp)
Messenger RNA biogenesis [BR:
bfin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BFINE_16450 (pnp)
Transfer RNA biogenesis [BR:
bfin03016
]
Prokaryotic type
tRNA degradation factors
BFINE_16450 (pnp)
BRITE hierarchy
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
BDW75850
LinkDB
All DBs
Position
1450685..1452472
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AA seq
595 aa
AA seq
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MNIILFSADGVDMPDALAGLAASAALAVSDIPFNGPISEVRVARIDGQFVINPTFEQLEK
ADMDLMVAATYENIMMVEGEMQEVSEAELLEAMKVAHEAIKIHCKAQMELTEAVGKTVKR
EYCHEVNDEELRKAVREACYDKAYAVAASGNNNKHERFDAFEAIREEFKAQFSEEELEEK
GPLIDRYYHDVEKEAMRRSILDEGKRLDGRKTTEIRPIWCEVGPLPGPHGSAIFTRGETQ
SLTSVTLGTKMDEKIIDDVLEHGKERFLLHYNFPPFSTGEAKAQRGVGRREIGHGHLAWR
ALKGQIPADYPYVVRVVSDILESNGSSSMATVCAGTLALMDAGVKIKKPVSGIAMGLIKN
PGEEKYAVLSDILGDEDHLGDMDFKVTGTKDGITATQMDIKVDGLSYEILERALNQAKEG
RMHILNKITETIAEPRAELKEHAPRIETMTIPKEFIGAVIGPGGKIIQGMQEETGAVITI
EEIDGMGRIEVSGTNKKCIDDAMRMIKAIVAVPEVGEVYKGKVRSIMPYGAFVEFLPGKD
GLLHISEIDWKRLETVEEAGIKEGDEIDVKLIDIDPKTGKFKLSRKVLLPRPEKK
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
gtgaacatcatcctcttctcggctgatggtgtagatatgccggatgcattggcaggactt
gcagcttctgcagcacttgccgtttccgatattccgttcaacggacctatctctgaagta
cgtgtggcacgtatcgacggtcagttcgttatcaacccgacttttgaacaactcgaaaaa
gcagatatggaccttatggttgccgctacttatgagaacatcatgatggtggaaggcgaa
atgcaggaagtgtctgaggctgaattgctggaagccatgaaagtggctcacgaagccatc
aagattcattgcaaggctcagatggagttgacagaagcggtaggtaagacggtaaaacgt
gaatattgtcacgaagtgaacgacgaagaattgcgtaaggcagttcgtgaggcttgttat
gacaaggcttacgccgtagcagcttcaggaaataacaataagcacgagcgttttgacgct
ttcgaagctatccgtgaagagttcaaggctcagttctctgaagaagagttggaagaaaaa
ggacctctgatcgaccgttactatcatgatgtggaaaaagaagcaatgcgccgttccatc
cttgacgaaggcaagcgtttggatggccgtaagactactgaaatccgcccgatctggtgt
gaggttggcccgttgcccggtcctcacggatccgctatctttactcgtggagagactcag
tcattgacttctgttacgctgggtactaagatggacgaaaagattatcgacgatgttctg
gaacacggaaaagaacgtttcctgttgcattataacttccctcctttctctacaggtgaa
gcaaaagcacagcgtggtgtaggccgtcgcgaaatcggccacggtcacctggcttggcgt
gctttgaaaggacagattcctgctgactatccgtatgtagtacgtgtagtttccgatatc
ctcgaatctaacggttcttcttctatggcaaccgtatgtgccggtacattggcattgatg
gatgcaggtgtgaaaatcaagaagccggtatcaggtatcgctatgggactgattaagaat
ccgggtgaagaaaaatatgccgtattgtccgatatactcggtgatgaggatcatctcgga
gatatggacttcaaagtgactggaacaaaggatggtatcactgctactcagatggatatc
aaggtagacggtctgtcatacgaaattctggaacgtgctttgaatcaggcaaaagaaggt
cgtatgcacatcctgaacaagattaccgaaacaattgccgagccgcgtgctgaactgaaa
gaacacgctccgcgtatcgagacaatgacgattcctaaagaatttatcggtgcagtgatc
ggtcctggcggtaagattattcaaggtatgcaggaagagacaggtgctgtgattactatc
gaggaaattgatggtatgggacgcatcgaggtttcaggaacaaataagaaatgtattgat
gatgcaatgcgtatgatcaaagcgatcgttgctgttcccgaagtaggcgaagtgtataaa
ggtaaagttcgttctatcatgccttatggtgcgtttgtcgaattcttgccgggcaaggac
ggtttgctgcacatctccgaaattgattggaaacgtcttgagactgtagaagaagccgga
attaaggaaggtgatgagattgacgtgaagttgatcgatatcgatccgaaaaccggtaaa
ttcaaactttctagaaaagttttgttgccaagaccggaaaagaagtaa
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