Bacteroides finegoldii: BFINE_17950
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Entry
BFINE_17950 CDS
T09648
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bfin
Bacteroides finegoldii
Brite
KEGG Orthology (KO) [BR:
bfin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bfin03009
]
BFINE_17950
Enzymes [BR:
bfin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
BFINE_17950
Ribosome biogenesis [BR:
bfin03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BFINE_17950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
BDW76000
LinkDB
All DBs
Position
1584146..1585609
Genome browser
AA seq
487 aa
AA seq
DB search
MSTENEEWRENSFNEENAGAGRDGNRSYNREGGERPYRPSYNREGGDRPYRPRFNANNEG
GDRPQRSYGDRPQRPRFNSEGGSYGDRSQRPRFNSEGGSYGDRPQRPRFNSEGGSYGDRS
QRPRFSSEGGDRPYRPRFNNGEGGDRPQRPYNREGGDRPYRPRFNNGEGGDRPQRPYNRE
GGDRPYRPRFNNGEGGGYRSNNGGGYRPRFNNDRQGGYRPRPRTADYDPNAKYSVKKQIE
YKEQFVDPNEPIRLNKFLANAGVCSRREADEFITAGVVSVNGEVVTELGTKIKRSDVVKF
HEEPVSIERKVYVLLNKPKDTVTTSDDPQERRTVMDLVKGACNERIYPVGRLDRNTTGVL
LLTNDGDLASKLTHPKFLKKKIYHVHLDKNLTKADMDQIAAGIQLEDGEIHADAISYTDD
FKKDQVGIEIHSGKNRIVRRIFESLGYKVVKLDRVFFAGLTKKGLRRGDWRYLTEAEVNY
LRMGSFE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagaaaacgaagaatggcgcgaaaattctttcaatgaagagaatgcaggtgcc
ggccgtgatggtaacaggtcttacaacagagaaggtggagaacgtccgtatcgtccttct
tacaatcgtgaaggaggggatcgtccgtatcgcccgagatttaatgccaacaatgaagga
ggcgaccgtccgcagcgttcatacggtgaccgtcctcaacgtcctcgcttcaatagcgaa
ggaggttcttacggtgaccgttctcaacgtccccgcttcaatagcgaaggaggttcatac
ggtgatcgtcctcaacgtccccgtttcaatagtgaaggtggttcatacggtgaccgttct
caacgtccccgtttcagtagcgaaggtggtgaccgtccttaccgtcctcgtttcaataac
ggtgaaggtggcgaccgtccacagcgtccttacaatcgtgaaggtggtgatcgtccgtat
cgtccccgtttcaataacggtgaaggtggcgaccgtcctcagcgtccttacaaccgtgaa
ggtggtgaccgtccgtatcgtccccgtttcaacaacggtgaaggtggcggctatcgcagc
aacaatggcggaggttaccgtccgagattcaacaacgaccgtcaaggaggataccgtcct
cgtccgcgtaccgctgattatgatccgaatgctaagtacagcgtgaagaaacagattgag
tacaaggaacagtttgtggacccgaacgaaccgattcgtctgaataagttcctggcaaat
gccggtgtttgttcacgccgtgaggctgatgaatttattacggcgggtgtggtttctgta
aacggtgaggtagtaactgaattgggcacaaagatcaaacgctcggatgtggttaagttc
cacgaagaaccggttagcattgaacgcaaagtatacgtgttgttgaataagccgaaagat
acggttactacatcggatgatccgcaggaacgccgtacagtaatggatttggtaaaaggc
gcttgcaatgaacgtatctatccggtaggacgtcttgaccgtaacaccaccggggtactg
ttactgacgaatgacggtgatctggcttccaagctgacacacccgaaattcctgaagaag
aagatttatcatgttcatctggacaagaatctgacgaaagcggatatggatcagattgca
gccggtatccagttggaagacggcgagattcatgcagacgctatcagctatacagatgac
tttaaaaaagaccaggtaggtatcgaaatccactccggcaagaaccgtatcgttcgccgt
attttcgaatcactgggttataaagtagtgaaactcgaccgtgtattcttcgccgggctg
actaaaaaaggtctgcgacgcggagactggcgttacctgacggaagcagaagtaaactac
ctccgtatgggttcgtttgaataa
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