Bacteroides finegoldii: BFINE_18680
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Entry
BFINE_18680 CDS
T09648
Name
(GenBank) DNA-directed RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfin
Bacteroides finegoldii
Pathway
bfin02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFINE_18680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfin03021
]
BFINE_18680
Transcription machinery [BR:
bfin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFINE_18680
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_23
PhyR_sigma-like
HTH_24
HTH_20
HTH_10
Motif
Other DBs
NCBI-ProteinID:
BDW76073
LinkDB
All DBs
Position
1644397..1644918
Genome browser
AA seq
173 aa
AA seq
DB search
MLDTDEKTFEKLFREHYSLLCNYANSIVCNEQAVEDIVQNFFIAVWEKKHLSITEDTFLP
YAYCAIKNSCINYYKSEIAKENFFTVLAEEWQLQLQEEEEFRYKQEVHAALQKLPEKCRK
VFLLKCVTGLRYKEIAEISDISVNTVKYHLGEAFRVMREELKDLMILLILIFS
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgctagatactgatgaaaaaacattcgagaagctctttagggagcattattcccttcta
tgtaattatgcgaatagcattgtctgtaatgagcaggcggtagaggacattgtacagaat
ttctttattgccgtctgggagaagaaacacttatctataacggaggatacttttcttccg
tatgcctattgtgctatcaagaacagttgtatcaactactataagtcagagattgccaaa
gagaattttttcactgtgctggcggaggaatggcaattacaactgcaagaagaagaggag
ttcagatataaacaggaggtacatgccgctcttcagaagttaccggaaaaatgcaggaaa
gtatttttgctgaagtgtgtcaccggtcttcgttataaagaaatcgcggaaatttccgat
atttcggtcaataccgtgaaataccatctgggagaggcttttcgtgtcatgagggaagaa
ctgaaagacctgatgatactattaatattaatttttagctga
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