Bacteroides finegoldii: BFINE_30560
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Entry
BFINE_30560 CDS
T09648
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bfin
Bacteroides finegoldii
Pathway
bfin03030
DNA replication
bfin03430
Mismatch repair
bfin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BFINE_30560
03430 Mismatch repair
BFINE_30560
03440 Homologous recombination
BFINE_30560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfin03032
]
BFINE_30560
03400 DNA repair and recombination proteins [BR:
bfin03400
]
BFINE_30560
Enzymes [BR:
bfin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BFINE_30560
DNA replication proteins [BR:
bfin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BFINE_30560
DNA repair and recombination proteins [BR:
bfin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BFINE_30560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BDW77261
LinkDB
All DBs
Position
2653265..2654044
Genome browser
AA seq
259 aa
AA seq
DB search
MKLNLKNPIVFFDLETTGTNINTDRIVEICYLKVYPNGNEESKTLRINPEMHIPEASSAV
HGIYDADVADCPTFKEVAKSIARDIEGCDLAGFNSNRFDIPVLAEEFLRAGVDIDMTKRK
FVDVQVIFHKMEQRTLSAAYKFYCEKNLEDAHTAEADTRATYEVLKAQLDRYDELQNDIA
FLADYSSYSKNVDFAGRMVYDDNGVEVFNFGKYKGMSVAEVLKKDPGYYSWILNSDFTLN
TKAVLTKIRLREMSNLITK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaatttgaaaaatcccatcgtctttttcgatcttgagacgaccggaaccaat
atcaacacagaccgtattgttgaaatctgttatttgaaagtttatccgaacgggaatgag
gaatccaagactttgcgtatcaatccggagatgcatattcccgaagcctcttccgccgtg
catggcatttacgatgcggacgtagcggattgccctactttcaaggaagtggcaaagagc
attgcccgtgacattgaaggatgcgatttggcaggattcaactccaaccgtttcgacatt
cctgtgctggcggaagaatttctgcgtgcgggagtggatatcgacatgacgaagcgcaaa
tttgtggacgtgcaggtgattttccacaaaatggagcaacgcaccctttcggcagcctac
aaattctactgcgaaaagaatctggaggatgcgcatacggcggaggcggacacacgtgcc
acttatgaggtactgaaagcgcagctcgaccgctatgacgagttgcagaacgatattgcg
tttttggcggactactccagctattccaagaatgtagactttgccggtcgcatggtctat
gatgataatggagtggaagtgttcaacttcggaaagtacaaaggaatgtctgtagctgag
gtcttgaagaaagatcccggatattacagttggattttgaatagtgatttcacgctgaat
acgaaagcggtattgacaaaaatccgtctgcgtgaaatgagcaatctgataacgaaataa
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