Bacteroides finegoldii: BFINE_34860
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Entry
BFINE_34860 CDS
T09648
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bfin
Bacteroides finegoldii
Pathway
bfin03420
Nucleotide excision repair
bfin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BFINE_34860
03430 Mismatch repair
BFINE_34860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfin03400
]
BFINE_34860
Enzymes [BR:
bfin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BFINE_34860
DNA repair and recombination proteins [BR:
bfin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BFINE_34860
MMR (mismatch excision repair)
Other MMR factors
BFINE_34860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
BDW77691
LinkDB
All DBs
Position
3003314..3004549
Genome browser
AA seq
411 aa
AA seq
DB search
MPYKIYGGLSFYQRKEIKDVIAYFRLVVNPNDEEAFKRIINYPARGIGDTTVGKIISAAT
DHGVSLWSTLCEPLTYGLNINKGTHAKLQGFRALIEGFITGQADKNAYEIGVDIIRQSGI
MNDVCQDTSPENLSRKENIEELVNGMNDFCALRQEEGNPNISLTDFLSEIALLTDQDSDK
ADDGEKITLMTVHSAKGLEFKNVFVVGLEENLFPSGMVGDSPRALEEERRLFYVAITRAE
EHCYLSFAKTRFRYGKMELGSPSRFLRDIDIHYLKMPHEAGISRSVDEGAGRFRREIEGG
FTHSASPSRTTPFGSASSERKERPKAQIIAPSVPRNLKKVSTVSGGSQAMSSGPVSVAGL
QAGQRIEHERFGLGEVMKVEGTGDNAKATIHFKNAGEKQLLLRFARFKVIE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgccttataaaatttatggcggactttcattctaccaacgtaaagagataaaagatgtg
attgcttatttccgtttggtggtgaatccgaacgatgaagaagcattcaaacgaattatt
aattatcctgctcgtggtatcggagatactacggtcggtaaaatcatatcagcggcaact
gatcatggagtcagtctgtggtcaacgctttgtgaaccgttgacctatggactgaacatc
aacaaaggtactcatgcaaagctgcaaggttttcgtgcattgatcgagggttttataacc
ggtcaggcggataagaatgcgtacgagataggtgtggatattatccgtcaatcgggtatt
atgaacgatgtgtgtcaggatacttctccggagaacctgagccgtaaggaaaacatagaa
gaattggtgaatggaatgaatgatttctgtgctttgcggcaggaggaaggcaatccgaat
atatctcttaccgattttctttcagagattgcgttgctcaccgatcaggattccgacaaa
gcggatgacggagaaaagataacattgatgacagttcattccgccaaagggttggaattt
aagaatgtttttgtagtcggtctggaagaaaacctattcccaagtgggatggttggcgat
tctccccgtgcattggaggaagaacgccgtttgttctatgtcgccattacccgtgcagag
gaacattgctacttgtcttttgccaaaacccgcttccgttatggaaagatggagcttggg
agtcccagtcgtttcttgcgtgatattgatatccattatttgaagatgccacacgaagcg
ggaatcagtcgttcggtggatgaaggcgcaggacgtttccgcagggagattgaaggagga
ttcactcattctgcttctccatcgcgtactacaccttttggaagtgcttcttcggaacga
aaggagcgaccgaaagctcagataatagctcccagtgtgccgagaaatttgaaaaaggta
agcacggtaagtggcggttctcaagcgatgtcttccggtccggtgtcggttgcaggatta
caagccggacagagaattgaacatgaacgttttggtttgggagaagtgatgaaggtagaa
ggcacgggagacaatgcaaaagcaactattcattttaaaaatgcgggagagaaacaacta
ttattgcgtttcgctcgttttaaggtaatagaataa
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