KEGG   Bacteroides finegoldii: BFINE_53550
Entry
BFINE_53550       CDS       T09648                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfin  Bacteroides finegoldii
Pathway
bfin02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bfin00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BFINE_53550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfin03021]
    BFINE_53550
Transcription machinery [BR:bfin03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BFINE_53550
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF GerE HTH_23 HTH_24 HTH_11 PhyR_sigma2 HTH_28 HTH_38 HTH_3 Xre-like-HTH
Other DBs
NCBI-ProteinID: BDW79560
LinkDB
Position
complement(4561462..4562046)
AA seq 194 aa
MENDKRQMEKDFQSFFTVNFPKVKNFARKLLKSDEDAEDVAQDVFCKLWQQPELWQHPND
KLDGYIFVTTRNIILNMFKHQRIEQEYQVSFIENAILCEIIEDDQALKDIYYKELLMILR
LALTKMPERRRMIFEASRFQGLSNKDIAEKLGVSIRTVEHQIYLALIDLKKILLFLVFFS
SFLSSIMILVVFKV
NT seq 585 nt   +upstreamnt  +downstreamnt
atggaaaatgataaaagacaaatggagaaggactttcaatctttcttcactgttaacttt
cctaaagtgaagaactttgctcgaaagttactgaaatcggacgaagatgcagaagacgtt
gctcaagatgttttttgtaaactgtggcaacaaccggaactgtggcaacatcctaatgat
aaattggatgggtatatctttgtaacaacacggaatattattcttaatatgtttaagcat
cagcgtatagagcaagagtaccaggtaagttttatagaaaatgcgatactttgtgaaata
atagaagatgatcaggcactaaaggatatctattataaagagttgcttatgattctccgg
cttgctttaacaaaaatgcctgagcgtcggaggatgatatttgaggctagtagatttcaa
ggactaagcaataaagatattgcggaaaaattgggtgtttctatccgtacggtagagcac
caaatttatctagcattaatagacctaaagaaaatacttctttttttagtttttttctct
tctttcttaagtagtataatgattttagttgtctttaaagtataa

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