Bacteroides finegoldii: BFINE_53550
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Entry
BFINE_53550 CDS
T09648
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfin
Bacteroides finegoldii
Pathway
bfin02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFINE_53550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfin03021
]
BFINE_53550
Transcription machinery [BR:
bfin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFINE_53550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
HTH_24
HTH_11
PhyR_sigma2
HTH_28
HTH_38
HTH_3
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
BDW79560
LinkDB
All DBs
Position
complement(4561462..4562046)
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AA seq
194 aa
AA seq
DB search
MENDKRQMEKDFQSFFTVNFPKVKNFARKLLKSDEDAEDVAQDVFCKLWQQPELWQHPND
KLDGYIFVTTRNIILNMFKHQRIEQEYQVSFIENAILCEIIEDDQALKDIYYKELLMILR
LALTKMPERRRMIFEASRFQGLSNKDIAEKLGVSIRTVEHQIYLALIDLKKILLFLVFFS
SFLSSIMILVVFKV
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgataaaagacaaatggagaaggactttcaatctttcttcactgttaacttt
cctaaagtgaagaactttgctcgaaagttactgaaatcggacgaagatgcagaagacgtt
gctcaagatgttttttgtaaactgtggcaacaaccggaactgtggcaacatcctaatgat
aaattggatgggtatatctttgtaacaacacggaatattattcttaatatgtttaagcat
cagcgtatagagcaagagtaccaggtaagttttatagaaaatgcgatactttgtgaaata
atagaagatgatcaggcactaaaggatatctattataaagagttgcttatgattctccgg
cttgctttaacaaaaatgcctgagcgtcggaggatgatatttgaggctagtagatttcaa
ggactaagcaataaagatattgcggaaaaattgggtgtttctatccgtacggtagagcac
caaatttatctagcattaatagacctaaagaaaatacttctttttttagtttttttctct
tctttcttaagtagtataatgattttagttgtctttaaagtataa
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