KEGG   Bacteroides finegoldii: BFINE_54130
Entry
BFINE_54130       CDS       T09648                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfin  Bacteroides finegoldii
Pathway
bfin02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bfin00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BFINE_54130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfin03021]
    BFINE_54130
Transcription machinery [BR:bfin03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BFINE_54130
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF GerE HTH_23 HTH_28 HTH_11
Other DBs
NCBI-ProteinID: BDW79618
LinkDB
Position
complement(4613750..4614289)
AA seq 179 aa
MEFMRDNNRKKVIDVFSRMFEVNYSKVKNLAYSLLKSELDAEDVAQEVFTKLWEQQSIWI
DNKRELDAYILIMTKNIALNISKHQKIRLEYKERFLEESSDLTDRDLLESIYFREILQGI
YLKLESIPERRRTVFELSRFYGKSHKEIADKMNISVRTVEQQIYLTLIELRKVLGAFAG
NT seq 540 nt   +upstreamnt  +downstreamnt
atggaatttatgagagacaataatagaaagaaagttattgatgtattttctcgcatgttt
gaggtcaattattctaaagtaaagaatttggcttatagtttattaaaatcagaactggat
gcagaagatgtagctcaggaagtttttactaaactttgggagcagcaaagtatatggatt
gataataaaagggaacttgatgcctatattctgattatgactaaaaatatagctctgaat
atatctaaacatcagaaaatcaggttggaatataaggagcgttttttggaagaatcatca
gatttgacagatcgtgatttgttggagagtatttattttcgtgaaatattgcaaggtatt
tatttaaaattagaaagcattcctgaacgcagaagaactgtatttgaacttagtcgtttt
tatgggaaaagtcataaagaaattgcagacaagatgaatatatcagtccgtacagtagaa
caacaaatatatttgacgttaatcgaattaagaaaggttttgggcgcatttgccggatga

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