Bacteroides finegoldii: BFINE_54130
Help
Entry
BFINE_54130 CDS
T09648
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfin
Bacteroides finegoldii
Pathway
bfin02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BFINE_54130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfin03021
]
BFINE_54130
Transcription machinery [BR:
bfin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BFINE_54130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
HTH_28
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BDW79618
LinkDB
All DBs
Position
complement(4613750..4614289)
Genome browser
AA seq
179 aa
AA seq
DB search
MEFMRDNNRKKVIDVFSRMFEVNYSKVKNLAYSLLKSELDAEDVAQEVFTKLWEQQSIWI
DNKRELDAYILIMTKNIALNISKHQKIRLEYKERFLEESSDLTDRDLLESIYFREILQGI
YLKLESIPERRRTVFELSRFYGKSHKEIADKMNISVRTVEQQIYLTLIELRKVLGAFAG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggaatttatgagagacaataatagaaagaaagttattgatgtattttctcgcatgttt
gaggtcaattattctaaagtaaagaatttggcttatagtttattaaaatcagaactggat
gcagaagatgtagctcaggaagtttttactaaactttgggagcagcaaagtatatggatt
gataataaaagggaacttgatgcctatattctgattatgactaaaaatatagctctgaat
atatctaaacatcagaaaatcaggttggaatataaggagcgttttttggaagaatcatca
gatttgacagatcgtgatttgttggagagtatttattttcgtgaaatattgcaaggtatt
tatttaaaattagaaagcattcctgaacgcagaagaactgtatttgaacttagtcgtttt
tatgggaaaagtcataaagaaattgcagacaagatgaatatatcagtccgtacagtagaa
caacaaatatatttgacgttaatcgaattaagaaaggttttgggcgcatttgccggatga
DBGET
integrated database retrieval system