Bifidobacterium adolescentis JCM 19861: B19861_03440
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Entry
B19861_03440 CDS
T09745
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bfj
Bifidobacterium adolescentis JCM 19861
Brite
KEGG Orthology (KO) [BR:
bfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfj03016
]
B19861_03440
Enzymes [BR:
bfj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
B19861_03440
Transfer RNA biogenesis [BR:
bfj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B19861_03440
Prokaryotic type
B19861_03440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BEK82402
UniProt:
A0ABN6ZKS4
LinkDB
All DBs
Position
419671..420591
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AA seq
306 aa
AA seq
DB search
MLDAVRLRIDLAYDGTGFYGWAKQPEIRTVQGEIERVLHTILRVPEGDPTEPLRLTVAGR
TDTGVHASHQVCHLDVNEDVLKRCVGHMDVPPVIALTRRLQRMLPADIAIRGIAPAPDGF
DARFSALERTYVYRIADRSSEVDPRTRNFVLHIDDELDLKAMNEAAAMTIGLHDFGSFAT
PNPGGTTIREVKTAYWRRVPQRTLIDDGMTMGERYRTPTVESGLVCFVIVADAFARNMVR
SLVNGCVQVGIGKRSLDWFAGKMAAPLREGSTGPIAPQGLTLEHIEYPADDQLAVRAEAI
RAKRTL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatgccgtgagactacgcatcgatttggcatatgacggtaccggcttctacgga
tgggcgaaacagcccgaaatacgtacggtacagggcgaaatcgaacgcgtgctgcatacc
attcttcgcgtaccggaaggagacccgaccgaaccgctgcgccttaccgtggccggacga
accgacaccggcgtgcacgcctcgcatcaggtatgccatctggacgtcaacgaggacgtg
ctcaaacgctgcgtcggccacatggacgtgccgcccgtcatcgcgcttacccgcagactt
cagcgcatgctgccggccgatatcgcaatccgcggcatcgcacccgctccggacggtttc
gacgcgcgtttctccgcgttggaacgtacctacgtgtaccgaatcgccgataggtcaagc
gaggtggaccctcgtaccagaaacttcgtattgcatatcgacgatgaacttgacctcaaa
gccatgaacgaagccgctgcgatgacgatcggcctgcacgatttcggctcgttcgccacc
ccaaatccgggcggcaccaccatacgcgaggtgaagaccgcgtattggcgtcgcgtgccg
cagcggacgcttatcgacgacggcatgacgatgggggagcggtaccgtacgccgaccgtg
gaatcgggcctcgtctgcttcgtgatcgtcgccgacgcgtttgcacgcaatatggtgcgc
tccctcgtcaacggctgcgtgcaggtcggtatcggcaaacgttccctcgactggtttgca
ggaaaaatggcggctccgctgcgcgaaggctccacaggaccgatcgcgccgcaaggactg
acgctggagcatatcgaatatccggccgacgaccagctggcggtccgcgccgaagccatt
cgcgccaagcgcacactgtag
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