Bifidobacterium adolescentis JCM 19861: B19861_03520
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Entry
B19861_03520 CDS
T09745
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bfj
Bifidobacterium adolescentis JCM 19861
Brite
KEGG Orthology (KO) [BR:
bfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfj03016
]
B19861_03520
Enzymes [BR:
bfj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B19861_03520
Transfer RNA biogenesis [BR:
bfj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B19861_03520
Prokaryotic type
B19861_03520
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BEK82410
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All DBs
Position
429779..430840
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AA seq
353 aa
AA seq
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MTTKPDNSGLLVIDKPQGVTSHDVVAAVRGALQMKRVGHAGTLDPMATGVLVVGFGNATR
LLNYIVDHDKTYLATIRLGQRTTTDDADGELLPEEGTIAEFPSRQTVEDAIAHHFTGRIE
QVPNSYSAIKINGQRAYDLAREGKDVELKARPVTISEFSVSAVRYGYASSVRAGSPLVNA
AEVAPDSAWHANTLEPDMQPVMELDVKVTCSAGTYIRALGRDLGDELGLGGHLTMLRRIR
VGRFSVDMPNVMTAHTEAKTFTNREGIEVTRNRAVLDDAEHAVDHALDLVASAAASMDML
PVTEQEATDLRFGRRIAHDIHTTMAAYVPETNDLVAIVERAKRGETKPVAVFN
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaagcctgacaactccggtctgctggtcatcgacaagccgcagggcgtcacc
agccacgatgtggtcgcggcggtgcgtggcgccctgcagatgaaacgcgtcggccatgcc
ggcacgctcgacccgatggccaccggcgtgctggtggtcggcttcggcaacgccacacgt
ctgctcaactacatcgtcgaccacgacaaaacctacctggccaccatcagactcggccag
cgcaccaccacggacgacgccgacggcgaactgctgccggaggagggaactatcgccgaa
tttccttcacgacagaccgttgaagacgccatcgcccatcatttcaccgggcgcatcgag
caggtgccgaactcctattcagccatcaaaatcaacggccagcgcgcctatgatctggcc
cgagaaggcaaggacgtggaactcaaagcccgtccggtgaccatctcggaattcagcgtt
tcggcagtgcgatacggctatgcctcatccgtgcgcgcgggttcgccgctcgtcaatgcc
gcagaagtcgctccggattcggcatggcatgccaacacgttagaaccggacatgcagccg
gtcatggaactcgatgtgaaagtgacctgttccgccggtacctacatccgcgcgctcggc
cgagatctgggcgacgagcttggtctcggcggccatctgaccatgctgcgccgcatccgc
gtcgggcgtttctcggtggacatgccgaacgtcatgaccgcccatacggaagctaagacc
ttcaccaaccgcgaaggcatcgaagtgacacgcaaccgtgcggtgcttgacgatgccgag
catgccgttgaccacgcactcgacctggtcgccagcgcggccgcttccatggacatgctt
cccgtcaccgaacaggaggcgacggacctgcggttcggccgtagaatcgcccacgacatc
catacgaccatggccgcgtacgttcccgaaaccaacgatctggtggcgattgtggaacgc
gccaaacgtggcgagaccaagccggtcgcggtcttcaactga
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