Bifidobacterium adolescentis JCM 19861: B19861_04720
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Entry
B19861_04720 CDS
T09745
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bfj
Bifidobacterium adolescentis JCM 19861
Pathway
bfj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B19861_04720 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfj03019
]
B19861_04720 (recQ)
03400 DNA repair and recombination proteins [BR:
bfj03400
]
B19861_04720 (recQ)
Enzymes [BR:
bfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B19861_04720 (recQ)
Messenger RNA biogenesis [BR:
bfj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B19861_04720 (recQ)
DNA repair and recombination proteins [BR:
bfj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B19861_04720 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HRDC
RQC
Helicase_C
RecQ_Zn_bind
Helicase_Sgs1
ResIII
Motif
Other DBs
NCBI-ProteinID:
BEK82530
LinkDB
All DBs
Position
576657..578681
Genome browser
AA seq
674 aa
AA seq
DB search
MGKTRAGCFALRGQRMALLHLETMTQAVDSADSVDPRALEALNRYFGYDSFRPGQSGIVS
AILTGHDVLGVMPTGAGKSICYQIPAAILPGVAIVISPLISLMRDQVDALNDVGLPAAFI
NTTQTPDEQDLVFAQALSGQIKLLYVAPERLETERFRNFAVRVPISLVAVDEAHCVSQWG
QDFRSSYLGIGEFIAGLPTRPTVAAFTATATERVRRDIVSILGLHTPSITVTGFDRPNLY
FDVISMPRKDKASWVASYIASHPDESGIVYCATRKETEALAESLNSAVAELRAAGGADVS
DIGTIAVAYHGGMSADAREKAQRDFVTDRVPVVVATNAFGMGIDKSNVRFVIHHNMPESI
EAYYQEAGRAGRDGEPSRCTLLWNESDIVTRRRLLDSDYENERLTPEEQEAVRASKRRLL
DAMVGYCRTTDCLHAYMTRYFGETAGAAAKTDGKCVGGCANCEHTFETIDVTDIARAISR
CVHDVNQHVGSGKIVKVLRGSKAQDLSYLNPESLPSFGMLDEVPEARIRDVLSQMATDGF
LTIAEGRLPIVGFGPRAAETVAPEFHYDIKKIKRADARARRTPDVSTPAVGSYVPDDGDE
ALFQKLRALRLDIARELGKPPYIVFSDKTLRDMVRVKPITDDQFLAVNGVGESKLKQYGE
RFMAAIREDSGDEA
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagacccgcgccggctgtttcgctctccgcggtcaacgcatggcattgctacac
ttggaaaccatgacgcaagctgttgattccgccgattccgtagacccccgcgcattggag
gcgctgaaccgctatttcggctacgattcgttccgtcctggacaatccggcatcgtctcg
gccatcctcaccggacacgatgtgcttggcgtcatgcccaccggcgccggcaaatccatc
tgctatcagattcccgcagcgatcctgccgggcgtcgccatcgtcatctcgccgctgatc
tcactcatgcgcgaccaggtcgacgccctgaacgacgtgggccttccggccgcgttcatc
aacaccactcagacgccggacgaacaggatctcgtcttcgcgcaggcgctctccggccag
atcaaactgctgtacgtggcgccggaacgtttggaaaccgaacgattccgcaacttcgcc
gtccgtgtgccgatctcgctcgtcgccgtcgacgaagcgcactgcgtctcccaatggggg
caggacttccgttcctcatatcttggcatcggcgaattcatcgccggactgcccacacgt
ccaacggtcgccgcgttcaccgccaccgccaccgaacgcgtgcgccgcgacatcgtttcg
attctgggcctgcacacaccgtccatcaccgtcaccggtttcgaccggccgaacctgtat
ttcgacgtcatcagcatgccacgcaaagacaaagcatcctgggtggcgtcctacatcgcc
agccatccggacgaatccggcatcgtctactgcgccacgcgcaaggaaacggaagcgctc
gccgaatcgcttaacagtgccgtcgccgaattgcgtgccgcagggggtgcggatgtgtcg
gatatcggcaccatcgccgttgcctaccatggcggtatgagcgccgacgcacgagagaag
gcgcaacgcgatttcgtcaccgaccgtgtgcccgtggtcgtggccaccaacgcgttcggc
atgggcatcgacaaatccaacgtgcggttcgtcatccaccacaacatgcccgaatccatc
gaagcgtactaccaggaggcgggtcgcgccggacgagacggcgaaccaagccgctgcacg
ctgttgtggaacgaatcggacatcgtcacccgccgccggctgctcgactcggactacgaa
aacgaacgattgactcccgaagagcaggaggccgtacgcgcgtcgaaacgccggctgctc
gacgcgatggtcggctactgccgtaccacggactgcctgcacgcgtacatgacccggtat
ttcggcgaaaccgcgggcgcggcggcgaaaacggacggcaaatgcgtgggcggttgcgcc
aactgcgagcacacattcgaaaccatcgacgtcaccgacatcgcccgagccatcagccgt
tgcgtgcacgatgtgaaccagcatgtcggcagcggcaaaatcgtcaaggtgctgcgcggc
tcgaaggcgcaggatctaagctatctcaaccccgaaagcctgccgtcgttcggcatgctc
gacgaagtgccggaagcgcgcatccgcgacgtgctgagccagatggccaccgacggcttc
ctgacgatcgcggaaggacgcctgccgatcgtcggcttcggaccccgtgcggcggaaacg
gtcgcacccgaattccattacgacatcaagaagatcaaacgtgctgacgcccgtgcgcgt
cgaacgcccgacgtgtccactcccgctgtcggatcgtacgtgccggatgacggcgacgag
gcgctattccagaagctgcgtgcgctgcgactggacatcgcgcgcgaactcggcaaaccg
ccgtacatcgtgttctccgacaagacgttgcgtgacatggtacgggtcaagccgatcact
gacgaccagttccttgccgtcaacggtgtgggggaaagcaagctcaaacagtacggcgaa
cggttcatggccgcgattcgggaggattccggcgacgaggcttga
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