KEGG   Bifidobacterium adolescentis JCM 19861: B19861_06220
Entry
B19861_06220      CDS       T09745                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
bfj  Bifidobacterium adolescentis JCM 19861
Brite
KEGG Orthology (KO) [BR:bfj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bfj02048]
    B19861_06220
Enzymes [BR:bfj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     B19861_06220
Prokaryotic defense system [BR:bfj02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   B19861_06220
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like ResIII EcoR124_C HSDR_N DEAD ArdA Sulphotransf
Other DBs
NCBI-ProteinID: BEK82680
LinkDB
Position
756099..759281
AA seq 1060 aa
MFYDKESDFEDDLVAVLKRHGWTDGVLEYPTEQDLIDNWANILFDSNKGIDRLNGQRLTK
GEMAQILEQIETLRTPLALNSFINGKTVSIKRDNPADTAHFGKEISLKIYDRQEIAAGQS
RYQIARQPIYPAKNKMLNDRRGDVCLLINGMPVIHIELKKSGIPISQATNQIAKYAHEGV
FTGLFRLVQVFVAMNPDDAVYFANPGEGDFNSNYFFHWADFNNEPIAANKHVGQDEWKRF
TSDLLSIPMAHQLIGFYTVADSADGCLKVLRSYQYQAVNAISDRVRTCKWDEPVPSGTPG
RPGGYVWHTTGSGKTMTSFKAAQLIAGSKDADKVVFLMDRVELGTQSLLEYRSFADDADD
VQGTENTDVLKSKLASIDPKDTLIVTSIQKMSNIKAGEGHITEEEVKKLAGKRIVFIIDE
CHRSTFGEMLQDIRHSFPNALYFGFTGTPIHEENRKKGATTSMVFGDCLHRYSIADGIRD
GNVLGFDPYMVLTYRDKDVRQAVALQKAKAATVEEAQADPAKAEVFYHYMDPKQMPMGPM
ETQAGEHVKGIEDYLTAAQYAQGTPHEDKVVEDILDQFPLLSRGNKFHAMLATSSIPEAI
SYYHLFKERAPQMHVTALFDPNVDNSDGAILKEDALKEIIGDYNELFDKDFIIPTWPKMK
KDITARLSHKRPYLTVDQHREERLDLLIVVDQMLTGFDSKWVNTLYLDKIIDYENIIQAF
SRTNRLFGPDKPFGTIRYYRKPHTMKGYIEAAVKLYSGDKPLDLFVQKLPENVRLMDARF
EEIASVFSAGGMEDFMRLPESVEACRKFAKLFVELNDFLESAKVQGFTWGRQEYSVAHDD
GSVEVVRPKLDERTYLILVQRYKEMFSSGEGPGSGPEAPYELDGHITEIDTGLIDTDYMN
ANFTKWLKALGGGDPALLASAEEELHKSFASLSQEEQRYAELFMHDVERGEIELEEGKTL
RDYITYYANSAKNSQVEQITKAFDVDGALLNEMMRLDLTETTLNEFGRFDRLKASVNRSL
AKAFFDKPDSPVSQFTANLLATKLLKSFILEGGFDLDDRK
NT seq 3183 nt   +upstreamnt  +downstreamnt
atgttctacgataaggaatcggatttcgaagacgatctggtcgcggtgctgaaacgccat
gggtggaccgatggtgtgttggaatatccaaccgaacaggatctcatcgacaactgggcc
aacatcctattcgacagcaacaaaggcatcgatcgcctgaacgggcagcgccttaccaag
ggtgagatggcgcagatccttgaacagatcgaaacattgcgcacgccattggcgttgaat
tccttcatcaacggcaaaaccgtgtccatcaaacgtgacaatcccgcagacacagcgcat
ttcggcaaggaaattagcctgaagatctacgatcgccaggaaatcgccgctgggcaaagc
cggtaccaaatcgcaagacagcctatttatccagctaaaaataagatgctgaacgatcgc
aggggagacgtttgcctgcttatcaacggaatgccggtcatccatattgaactgaagaaa
agcggcattcccataagccaggccaccaatcaaatcgccaaatacgcgcatgaaggcgtg
ttcaccgggctgttcagactcgtgcaggtcttcgtggccatgaatccggatgatgccgtg
tacttcgccaatcccggtgaaggcgatttcaacagcaactacttcttccactgggctgac
ttcaacaatgagcccatagcggcgaacaaacatgtcgggcaggatgaatggaagcgtttc
acatctgatctgctatccattcccatggcacaccagctcatcgggttctatacggtcgcc
gattccgcagacggatgcctcaaagtgctacgcagctaccaataccaggcggtgaacgcc
atttccgaccgtgtacgcacctgcaaatgggatgagccggtgccaagcggcacgccgggc
cgtccgggcggttatgtgtggcacaccactggctcgggcaaaaccatgaccagcttcaag
gctgcgcagctcatcgctggctcgaaagatgccgacaaggtggtcttcctcatggaccgt
gtcgaattgggcacgcagtcgctgctggaataccggtcgttcgcggatgatgccgatgat
gtgcagggcacggaaaacacggatgtgctcaaatcgaaactggcaagcatcgaccccaaa
gacacgctcatcgtcacctccatccagaaaatgagcaacatcaaagcgggcgaggggcat
atcaccgaagaggaagtgaagaagctcgctggcaaacgcatcgtattcattatcgacgaa
tgccatcgttccacgttcggcgagatgctgcaggatattcgccattccttcccgaacgcg
ttgtatttcggtttcacgggcactccgattcatgaggagaaccgtaagaagggcgcgacc
acatcaatggtgttcggcgattgccttcaccgatacagcatcgccgacggcatccgcgat
ggcaatgtgctcggattcgacccgtacatggtgttgacctaccgagacaaggatgttcgt
caggctgtcgcgttgcagaaagcgaaagccgcgacggttgaggaagcccaggcagatccg
gcgaaagctgaggtgttctaccattacatggatccgaagcaaatgccgatgggacccatg
gaaacgcaggccggagaacatgtcaaaggcattgaggactatctgaccgcagcgcagtat
gcgcaaggcacgccacatgaagacaaggtcgtggaggatattctcgaccaattcccattg
ctgagcagaggcaacaaattccatgcgatgctggccacgagttccattcccgaggcgatc
agctattaccatctgttcaaggaacgtgctccgcagatgcacgtgaccgcgctgttcgac
cccaacgtcgacaattccgacggcgcaatcctcaaggaggatgcgcttaaggaaatcatc
ggcgattacaacgaactgttcgacaaggatttcatcatccccacatggccgaagatgaag
aaagacatcaccgcgcggctttcccacaagcgtccgtacctgacggtcgaccagcaccgt
gaggagcggctggatctgctgattgtggttgatcagatgctgacaggtttcgattccaag
tgggtcaacacgctgtacctcgacaaaatcatcgactatgagaacatcatccaggcgttc
agtcgcacgaaccgactgttcggtcccgacaagcctttcggaactattcgctactaccgc
aagccacacaccatgaaggggtatatcgaagcggcggtaaaactgtattccggagacaag
ccgctcgatctgttcgtgcagaaactgccggaaaacgtgcgcctgatggatgcgcgtttc
gaagagatcgcttccgtgttcagtgccggaggcatggaagatttcatgcgattgccggaa
tcggtggaggcatgccgcaagttcgcaaaactgttcgtagaactcaatgattttctggaa
tccgccaaagtgcaaggattcacttgggggcggcaggagtattccgtcgcccatgacgat
ggatccgtggaggttgtgcggccgaagcttgatgaacggacatatctgattcttgtacag
cgatataaggagatgttcagcagcggcgaaggccccggcagcggtccggaagcaccatat
gaacttgacggccatatcactgagatagatacaggattgattgatacggattacatgaac
gccaacttcaccaaatggctcaaggcgcttggcggaggcgatccggccctgttggcatca
gccgaggaggagttgcataagtcgttcgcttcgctcagccaagaggaacaacggtatgcc
gaactgttcatgcatgatgtggaacgtggcgaaatcgagttggaggaaggcaagacgcta
cgcgactacatcacatattacgcgaacagcgccaaaaacagccaagtggagcaaatcacc
aaggcgtttgacgtggatggggcgttgctcaacgagatgatgcggcttgaccttacagag
acaaccctgaacgaattcggacgattcgaccggttgaaagcgtcggttaacaggtctttg
gcaaaggcgtttttcgataagccggatagtccggtctcccaattcacggcgaatcttctc
gccacgaagctgctgaagagctttatccttgagggaggattcgatttggacgatcggaaa
tag

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