Bifidobacterium adolescentis JCM 19861: B19861_12290 Help Entry B19861_12290      CDS       T09745                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism bfj  Bifidobacterium adolescentis JCM 19861 Brite KEGG Orthology (KO) [BR:bfj00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:bfj03400]     B19861_12290 Enzymes [BR:bfj01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      B19861_12290     5.6.2.6  RNA 3'-5' helicase      B19861_12290 DNA repair and recombination proteins [BR:bfj03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     B19861_12290 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr DEAD WHD_3rd_Lhr WHD_4th_Lhr Helicase_C ResIII Cas3-like_C_2 PhoH DUF6406 AlkZ-like Motif Other DBs NCBI-ProteinID:  BEK83287 UniProt:  A0ABM8IUQ9 LinkDB All DBs Position complement(1366616..1371460) Genome browser AA seq 1614 aa AA seqDB search MYECMDLFSEATNAWFKHAFNAPTEAQRLAWPAIRSGENVLVVAPTGSGKTLCAFLSAID RLMTKEGDDLLRTSGGGDGTAESDCNAKKRKPVRGVKVLYISPLKALGVDVAKNLQAPLA GIAGQCEAMGLPSPKVSVGIRSGDTTPQERRRIVSHPPDILVTTPESLFLLLTSKARRIL SAVDTVIVDEVHAIAGSKRGAHLALSLERLESLAGRSVQRIGLSATVEPPAEAARLLGGT RPVRVIRPESHPDMDLKVVEPLSAMRDPVSDDAGRRAGAVKLPNRHTTHISGVSPAMEAL AERKGLTSVGGDEHTSRVSTGGSVWPAIERSVLDEVLKHHTTLVFVNSRGLAEKLTARLN DLYAQLRTSRKTKSETAIEADAGWDALSDRRLGRTDLSVSDNASQPESTASDSTQPYPDL GSPEGREGFAKHYDSVVGSTTMLVSSHADADAIAMAHHGSVSKDRRKQIEEQLKRGQLRC VVATSSLELGIDMGSVDLVIQIAPPLSVSSGLQRVGRADHKVGGVSHALFYPITREQIIG TAASIECMRSGDIETLTIPCTPLDVLAQQTVAAAAMDDLKPDDWYVTVRKAAPFEDLDRT MFDAVMGMMTGAYNGEDFSAFRPPLQYNEEAGLISARPGAQRLAVTSGGTIPDRGTYTVV LPEEGSGPGPRKVGELDEEMVYESRVGDVITLGTSTWQIQEITRDRVVVVPAPGRTARLP FWHGEGDGRDAAFGRSQGRFIRDMAQGLRAEVSDGIAGDKTSRFDTTTIARLRRDGLDDN AIGNLADLLAEQRAATGTIPNDRELVVERCQDEEGDWRVIVHSPYGRRVHEPWAMAITTC IKQRYGFDGQVYAADDGIIIRLPDGDGNLPIRELLLFDMDELQRIIETQVGESVLYAARF RECAARSLFLPRANPGKRVPLWQQRLRASQLLNAARTRKNFPLLLETARECLQDVYDLPA LKHVMSGLRSGVISLSETVTETPSPFAENMLFGYVGAVMYQYDVPQAERSTQLLSMDPEV LERLLGATDMASLLDADVIAQIGKELAGRTFWNDLDETDIAGRVARYVKTHGPFTADQMI AELGLDAVQGVRMLDELHAKGELLKGHFVDDAAGADANGSDDSASERSPRQTPQQWLHKD VFRRIRALSLAKARKAIKPVEPAVYQAFLLDRQGVGPVGGARYEGVDGLMRVIEQLEGIY LNASVWESSVFPARVRDYQPSMLDELLASGDVVWVGSKINGSNAKEAGGIAFHPADSRLL TKPGEQSQNNAYSAGTMTVPETILAALSNGGAFHARQLSTATKAIWQEHAEVNVNPETGE IILPAWGESQFEEALWSLVWQGKVTNSSFAPVRALAQGTVSVRAPRTAARRRVRIHASTP ATLGGLWSAVDSSRTSPMAIPDQTDDTAGKPTAGIEEYDIALIESLLDRYGVIAAPLIDK EQVAGGFSGLYPVLKRMEEHGNLVRGMFVKGFGAAQFAGRDTVDALRGDDEARSQSCVAL DVTDPANLTGSAITWPEQHHMKPARRAESVIVLDHGMPVLFAVPKSHRIVSFTDDERILQ PACTELAYALQHQSKGSVSFAEMNGESLKERNEYRRLLHAAGFVDSPQGMKLYG NT seq 4845 nt NT seq  +upstreamnt  +downstreamnt atgtacgaatgcatggacttgttctcggaggctaccaatgcctggttcaagcatgcgttc aatgctccgacggaggcgcaacgtttggcatggccggccatccgctccggcgagaacgtg ttggtggtggcgcccaccggctccggcaagacattgtgcgccttcctttccgcaatcgac cgtctgatgacgaaggagggcgatgacttattgcggacgtccggcggtggggacggcacg gctgaatccgattgcaatgccaagaaacgtaaacccgtccgcggcgtcaaggtcctgtat atttcgccattgaaggctctgggcgtggatgtggccaagaacctccaagcgccattggct ggcatcgccggacagtgcgaggcgatgggattgccatcgccgaaagtcagcgtgggcata cgaagcggcgacaccacgccgcaggaacggcgcagaatcgtcagccatccgccggatatc ctcgtaaccacgccagaatcgctgttcctgctgctcacctccaaggcgcgacggatactt tccgccgttgacaccgttatcgtggatgaagtgcacgccatcgcgggctccaaacgtggc gcgcacctggcgctgagcttggaacgattggaaagccttgccggccggtctgtccaacgc atcgggctttccgccactgtggaaccgccggccgaagccgcacgtttacttggcggcacg cggccggtacgcgtcatcagacccgaatcgcaccccgacatggatctgaaagtggtggaa ccgctttcggccatgcgcgatcctgtctccgacgacgcagggcggagggcaggcgccgtg aaacttccgaaccgccataccacgcatatttccggggtgagtcctgccatggaggcattg gcggaacgtaaaggactgacttcggtcgggggagacgaacatacctcacgggtttcgacc ggaggttcggtatggccggccatcgaacgcagcgtgcttgacgaagtgctgaaacaccac accaccctcgtgttcgtcaactcccgtggccttgcggaaaaactcaccgcacggctcaac gacctgtatgcgcaattgcgcacatcccggaaaaccaagtccgaaacagccatcgaagcg gacgcagggtgggatgcgctgtccgaccgtaggcttggccgaacggacttgagtgtgtcg gacaacgcatcccagccggagtccacagccagtgattccacccagccgtatccggatctg ggctccccggaaggccgtgaaggcttcgccaaacactacgattccgtggtcggatccacc accatgctggtctcctcgcatgcggacgccgacgcgatcgccatggcgcatcatggttcc gtttccaaagaccggcgcaaacagatcgaagagcagctcaaacgcggccaattgcgttgc gtggtcgccacatcgagccttgaactcggcatcgacatgggttcagtggatctggtcatc cagatcgcaccgccattgtccgtgtcctcgggattgcagcgggtggggcgcgccgaccac aaggtcgggggagtctcgcatgcactgttctacccgattacacgagagcaaatcatcggc acggccgcaagcatcgaatgcatgcgttccggagacatcgaaacactgaccattccatgt acccccttggacgtgcttgcccagcaaaccgtcgccgccgcggcgatggatgatctgaaa ccagacgactggtacgtgaccgtgcgcaaggccgcgccattcgaagatctcgacagaacc atgttcgatgctgtgatgggcatgatgaccggtgcctacaacggcgaggatttctccgcc ttccgacctccattgcaatacaacgaagaggcgggtctcatctccgcgcgccctggcgct caacgactggccgtgaccagcggaggcaccatacccgaccgaggaacctacaccgtggtg cttcccgaagaaggctccggaccaggcccacgcaaagtgggggagctggatgaggaaatg gtgtacgaatcccgggtcggagacgtcatcaccctcggcacatcgacctggcagatccag gaaatcacccgggaccgtgtggtggtggttcctgctccagggcgtaccgcccgactgccg ttctggcatggcgaaggcgacgggcgggacgcggcattcggacgatcccaaggccgattc atacgcgatatggcgcaaggactacgcgcggaagtctcggacggcatcgcaggagacaag accagccgattcgacacgacaacaatcgcacgtctacgtcgtgacggattggatgacaac gccatcggcaatcttgccgacctgcttgccgaacagcgcgccgccacgggaacgattccc aacgaccgtgagctggtcgtcgaacgctgccaggatgaagaaggcgattggcgtgtgatc gtccactcgccatacggcagacgcgtgcacgaaccatgggccatggccatcaccacatgt atcaaacaacgatacgggttcgatgggcaggtatacgcggccgacgacggcatcatcatc cgcctcccggacggcgacggcaacctgccgatccgcgagctgctgctgttcgacatggac gagctgcaacgcatcatcgaaacgcaagtcggcgaaagcgtgctgtatgccgcacgattc cgagaatgcgcggcgcgatcgctgttcctgccacgcgccaaccccggcaaacgcgtcccc ttatggcagcagcggctgcgcgcgtcgcaactgctcaacgccgcccgaactcggaagaac ttcccgttgctgttggaaaccgcacgcgaatgcctacaggacgtgtacgatctgcccgcg ctgaaacatgtgatgtccggattacgctccggcgtcatctctttgagcgagaccgtcacg gaaacgccgtcgccgttcgcggaaaacatgctgttcggatacgtgggcgcggtcatgtac caatacgacgtgccgcaagccgaacgcagcacgcaactgctgtccatggacccggaagtg ctggaacgtcttctgggcgccacggacatggcttcgctgttggatgccgacgtcatcgcg cagattgggaaggagcttgccggacggacgttctggaacgatttggacgagaccgacatt gccggccgtgtggcgcgatatgtcaaaacgcatggcccattcaccgcggatcagatgatc gccgaactgggattggacgctgtccaaggcgtacgcatgttggatgaattacatgccaaa ggcgaactgctgaaaggccatttcgtcgatgatgcggccggagcggacgccaatggttcc gatgattcagcatcggaacggtcacctcggcaaacgccccagcaatggctccacaaagac gtgtttcggcgtatccgcgcgctttcgcttgccaaggcacgcaaagccatcaagccggtg gaaccggccgtctatcaggcgttcctgttggacagacaaggtgtcggacctgtgggtggc gcccgatatgaaggcgtcgacgggctgatgcgtgtgatcgaacagcttgaaggcatatac ctcaacgcctccgtttgggaatcctcggtcttccccgcacgcgttcgcgactaccaaccg agtatgttggacgaactgctcgcatccggagacgtggtatgggtcggctccaaaatcaat ggttccaacgccaaggaagccggcggcatcgcattccatccagctgattcacggctgctg acgaaacccggcgaacaatcgcagaacaatgcctatagtgccggaaccatgaccgtgccg gagacgatacttgccgcattatcgaatgggggagccttccatgcgcggcagctttccaca gccaccaaagccatctggcaggaacatgcggaagtcaacgtgaatcctgaaacaggggaa atcatccttcccgcatggggcgaaagccagttcgaggaagccttgtggtccttggtatgg caaggcaaagtgacgaacagttcattcgctcccgttcgggccttggctcaaggcacggtt tcagtgcgcgcgccacgcactgccgcacgcagacgcgtacggatccacgcctcgacaccg gcgacgctcggtggattatggtccgcggtcgactcgtcccggaccagtccaatggcgata ccggatcaaacggacgataccgccggcaaaccaacagccggcatcgaggaatacgacatc gcattgatcgaatcgctgctcgaccgatatggcgtgatcgccgctccgctaatcgacaag gagcaggtcgcaggcggattctccggactatacccggtactcaaacgtatggaggaacac ggcaatctggtcagaggcatgttcgtcaaaggattcggagcggcccaattcgccggacgt gacacagtggacgccttgcgcggcgacgacgaggcgcgcagccaatcctgcgtggcgctc gacgtgaccgacccggccaacctgacaggctccgcgatcacatggcccgaacaacaccat atgaaaccggcgcgcagagcggaatcggtcatcgtgctcgaccacggcatgccggtgctg ttcgccgtgccgaaaagccacagaatcgtcagcttcaccgatgacgagcgaatattgcag ccggcatgtacggaacttgcctatgcattgcagcatcagtccaagggcagcgtcagcttc gccgaaatgaacggtgaatcattgaaggaacgcaacgaatacagacgtttgctgcatgct gccgggttcgtggacagcccacaaggcatgaagctatatggctga

DBGET integrated database retrieval system