Bifidobacterium adolescentis JCM 19861: B19861_12310
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Entry
B19861_12310 CDS
T09745
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bfj
Bifidobacterium adolescentis JCM 19861
Brite
KEGG Orthology (KO) [BR:
bfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfj03032
]
B19861_12310
03400 DNA repair and recombination proteins [BR:
bfj03400
]
B19861_12310
Enzymes [BR:
bfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B19861_12310
DNA replication proteins [BR:
bfj03032
]
Prokaryotic type
DNA Topoisomerases
B19861_12310
DNA repair and recombination proteins [BR:
bfj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B19861_12310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Osteopontin
Motif
Other DBs
NCBI-ProteinID:
BEK83289
LinkDB
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Position
complement(1373013..1375337)
Genome browser
AA seq
774 aa
AA seq
DB search
MAKDNYGAESLTVLEGLDAVRKRPGMYIGTTDSQGLMHCLWEIIDNAVDEALAGACNHII
VTLHDDGSVEVADNGRGIPVDVEPKTKLTGVEVVLTKLHAGAKFGNSSYGASGGLHGVGS
SVVNALSSRLDVEVDRDGKTHHMAFHQGHPGVYSDVDPEHPSPDSPFKKTRKNRPTELEI
IGKVSPKTTGTRIRYWADPEIFNDTAEFSYDQLIDRVRQTSFLVPGLKITVIDENIPETG
DESIDEMLEVDDNVIEQVTEENTSAETDDIGTSADILQEDSAEADESAESQENDAATQSQ
ETVSQPVQPKYPHARVEEFCHTGGVKDFVDFLSKGEAVSDIWRIAGEDTYVEETQAVGDD
GELHAQKVTRDCAVDIAMRWTNGYDTTMRSFVNVVETPGGGMHVDGFLQGITKQVRKAIE
DNARKLKVNLKDSHMKVERDDILAGLVAVVTVRIAEPQFQGQTKDVLGTAQVKPIVSRMT
DKQFGEMITGSKRGYKEQSGRVLEKIVGEMHARVQARKTKEVTRRKNALESASMPPKLSD
CQPGNDDVAELFIVEGDSALGTAKAARNSGFQALLPIRGKILNVQKASLAQMLSNKECAA
IIQVVGAGSGASFDIEQARYNKIIMMTDADVDGAHIRILLLTLFYRYMRPLIEYGHVYAA
VPPLHRIALTGTHKGEYIYTYSDDELAGKLAELDKKHIGYNEDIQRYKGLGEMDADQLAD
TTMDPRTRMLRRIRMEDAEQASHIFSLLMGDDVPPRKAFIVENADDFDRSKIDT
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggataattacggtgctgagagtcttaccgtgctcgaaggcttggatgcggtg
cgcaaacgtccgggcatgtacatcggcacgaccgacagccagggcctgatgcactgcctg
tgggagatcatcgacaatgccgtcgatgaggctcttgcgggagcctgcaaccacatcatc
gtgaccttgcatgacgatggttccgttgaagtggcggacaatggccgaggcattccggtg
gacgtggagccgaaaaccaagctcaccggcgtggaagtggtgctgaccaagctgcatgcc
ggcgccaaattcggcaattcctcgtatggcgcttccggcggtctgcatggtgtcggctca
tccgttgtgaacgcattgagctcccgtctcgacgtggaagtggatcgtgacggcaaaacc
caccacatggctttccatcagggccaccccggagtgtattccgacgttgatccggaacac
ccgtctcccgattcgccattcaagaagacgcgcaagaatcgtcccaccgaacttgagatc
atcggcaaagtcagtccgaagaccacgggtacccgcatccgctattgggcggatccggag
attttcaacgacaccgctgaattcagctatgaccagctcatcgaccgtgtacggcagacc
agtttcctggtgccagggctgaaaatcaccgtcatcgacgagaacattcccgaaaccggc
gacgagtccattgacgaaatgctggaagtcgatgacaatgtcatcgaacaggtgacggaa
gagaacacgtccgctgaaacggatgatatcggaacctctgccgacatactgcaggaggat
tcagccgaagctgatgagtcagccgaatcgcaagaaaacgatgctgccacgcaatcgcag
gaaaccgtttcccagcccgtgcagccgaaatatccgcatgcgcgcgtcgaagaattctgc
cataccggaggcgtgaaggatttcgtcgacttcctgtccaaaggcgaagcggtctccgat
atttggcgcatcgccggcgaggacacgtatgttgaagaaacgcaggcggtcggagacgat
ggtgaactgcatgcgcagaaggtgacgcgtgattgcgcagtcgatatcgccatgcgatgg
accaacggctacgacaccaccatgcgcagcttcgtcaacgtggtggagacgcccggcggc
ggcatgcacgtggacggcttcctccaaggcatcaccaagcaggtgcgcaaggccatcgag
gacaacgcgcgcaaactcaaggtgaatctcaaggattcccatatgaaggtggaacgtgac
gacattctcgccggtctggtggccgttgtcaccgtccgcatcgccgaaccgcagttccaa
ggccagaccaaggacgtgctcggcaccgcgcaagtcaagccgatcgtctccagaatgacc
gataagcagttcggtgagatgattaccggctccaaacgcggttacaaggaacagtccggc
cgcgtgctggagaaaatcgtcggcgaaatgcatgcccgcgtgcaggcgcgcaagaccaag
gaagtcacacgccgtaagaacgcgcttgaatccgcgtccatgccgccgaaactgtccgac
tgccagcccggcaatgacgatgtggccgaactgttcatcgtcgagggtgattccgcattg
ggcacagccaaggccgcccgtaattccggtttccaagcgttgctgccgattcgaggcaaa
atcctcaacgtgcagaaggcatcgctcgcgcagatgctgtccaacaaggaatgcgcagcc
atcatccaggtggtcggcgcaggatccggcgcaagcttcgacatcgaacaggcccgatac
aacaagatcatcatgatgaccgatgccgatgtcgacggcgcgcacatccgcatcctgctg
ctgacgctgttctaccggtacatgcggccgcttatcgaatacggtcatgtgtatgccgca
gtgccgccgctgcatcgtatcgcgttgacgggtacgcataagggcgagtacatctacacg
tattccgatgatgagttggcaggcaaactcgccgagcttgataaaaagcacatcggctac
aacgaggacatccagcgttacaagggtttgggtgagatggacgccgaccagctggccgat
accaccatggatccgcgcacccgcatgctgcgccgtatccgcatggaggacgccgaacag
gccagccacatcttcagcctgctcatgggtgatgacgtgccgccgcgcaaggcgttcatc
gtggagaacgccgacgatttcgaccgttccaagatcgacacctga
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