Bifidobacterium adolescentis JCM 19861: B19861_15230
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Entry
B19861_15230 CDS
T09745
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
bfj
Bifidobacterium adolescentis JCM 19861
Brite
KEGG Orthology (KO) [BR:
bfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfj03400
]
B19861_15230
DNA repair and recombination proteins [BR:
bfj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
B19861_15230
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Gene cluster
GFIT
Motif
Pfam:
Vsr
PNP_phzG_C
MTES_1575
DUF5014
Motif
Other DBs
NCBI-ProteinID:
BEK83581
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Position
complement(1691621..1692154)
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AA seq
177 aa
AA seq
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MTAEHRRQTAKPGKTGKPKKTGKPRKTGKPEKYERGTRSYTMSHIRGKDTSIERMVRSFL
FAKGLRFRKNDKRYPGHPDVVLPKYRTIIFVNGCFWHMHEGCPKATRVPKSNVEFWTAKL
LRNHERDARQRAELEADGWKVIVVWECELGKKVRDERLERLYREIVDDSGKADDSGK
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcagagcatcgcaggcagacagccaaacccggaaaaaccggcaaacccaagaaa
accggcaaacctagaaaaaccggcaaacccgaaaaatacgagcggggcacgcgcagctac
accatgtcccacatccgcggcaaagacacatccatcgaacggatggtacgtagctttctg
tttgccaaaggcttgcgattccgcaaaaacgacaagcgatacccaggccacccggacgtg
gtactaccgaaataccgtacgatcatattcgtcaacggctgcttctggcacatgcacgaa
ggctgtccgaaagccacacgcgtgcccaaatcgaacgtcgaattctggaccgcgaaactg
ctgcgcaatcacgaacgagacgcgaggcagcgcgccgaactcgaagcggacggctggaaa
gtcatcgtggtctgggaatgcgagctcggcaagaaagtgcgcgacgaacggttggaacgt
ctttaccgcgaaatcgtggacgattccggaaaggcggacgattccgggaaatga
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