Bifidobacterium adolescentis JCM 19861: B19861_15510
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Entry
B19861_15510 CDS
T09745
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bfj
Bifidobacterium adolescentis JCM 19861
Pathway
bfj03420
Nucleotide excision repair
bfj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B19861_15510
03430 Mismatch repair
B19861_15510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfj03400
]
B19861_15510
Enzymes [BR:
bfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B19861_15510
DNA repair and recombination proteins [BR:
bfj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B19861_15510
MMR (mismatch excision repair)
Other MMR factors
B19861_15510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
BEK83609
LinkDB
All DBs
Position
complement(1736142..1740257)
Genome browser
AA seq
1371 aa
AA seq
DB search
MNGSNGMNGSMSTNGATAKGDAMGTAPAATPKFTDSPEQAAVIQAPSYEDVVVVAGAGSG
KTYTMTRRIITLIDQGISPEKILGLTFTRKAASELLSRVSAAVTRNQAGRGTRVAFLKPE
VSTYDAFFQTIVRQYGLLVGFDQNTQPLSEAGALQLIHTVLDKHMDQLMAFDQGGDELGK
FSTIAGNVFTLSNAIAGAMIGSDCTSFDEAVERVRAWDKAFVAQVAKALEDEDVPDDEPK
VGKAPKQKKKESDTAFEARKREYRAQCHQLCVHKTAKLAGTARKRDLLLDLVADYHAEKR
ALNMAEFSDFTIAAFQLVTRFPSIGATYRKRYTHVLLDEYQDTSTTQAALLTALFHADST
HRSAVNAVGDPFQSIYAWRGASPGAFRMLQHDFGHDATDKPYTLTVTRRNSRMVLEAANN
LTKPLRLPARRRGSSLMREVDVPPLANIDNAPEGTLGVLGYATFGQEIDAIVRFAKQAIA
LHTPTENELADGAKDNRPHVALLFRSKTQMPAYEDALEQAGLTTLVVGQAALLERPEIKD
ILALLHVVCDHTDSAALMRLLATPRFGLSADDLQALAGIAERLNTAQRYRALVSAGIVEA
DANPSDADIRATVRAYRDQVPNAVFLIDVLLRGDLRHLVDGVLSRTGAASVIHAGRVIQQ
VQRTAGHPLPEVVRTAITALGLDIDLLLAERMRHPDAGNRVTSHAASSLDAMLSLVDTYL
QEIAAQGTPSLRAFISWVDSLRDASDDNATAPDTPVDVVLMTVHQSKGLEWDAVAVVGMR
DGTFPSSQGDRLSVKTDEDHPGGRRDGVWEPPEYFEKAHTWLEDPSAVPVPVRADADILP
RFPHDAPIGGNPVESLDGLDDAEVIDDEVFGTLRTMAVDDMEGMDPASLYLTQQEEYGRR
LHADERRLAYVALTRARYEALLVYSGCNETSRDSRLAEGKKSAAPSNFWLETRDSMNGIV
TAVREPDNLSDDVDGSPHTLGLDLPDGYFVGEHARDFENAVVGDAWNTPLEPVSDDHTLP
WPCDLSADVADKLRAAAEQVRAVESDEPNIAESTGTQGDVADESATPSPETGNSLLRLAK
LLVADEHLMPEPDAADAGESQDAFDEAVRAKGERILAAGRQNVTSLQARAGSMGERDSRA
YWRGLVRPIPHVASPAAQLGTRFHAWAERFIMADADVDGIGGTEGAAGMAAQSRAELIAL
IGDTQVDADNGGVQSQDAPSQDAQLRDERKLAAWQRRLVASPWAKRRPAWAERQLVVDMS
QLGTIVNGKLDAVFFGGLDETDEMKRYTVVDWKTGVKPRKPDEIKEKLAQLDLYRLLLAA
MEGVPLDAIDACLYYVSEPHEADRELDALDKTEEEILAELSYGIPQQSDND
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggagcaacggtatgaacggaagcatgtcaacgaacggggccacagcaaagggc
gatgcgatgggcactgcgccggccgccacgccgaaattcaccgacagtccggaacaggcc
gccgtcatccaagccccctcatacgaggacgtggtcgtggtggcgggcgccggctccggc
aaaacctacaccatgacccgccgcatcatcaccctcatcgaccaaggcatcagtcccgag
aagattctgggcctgaccttcacacgcaaagccgcctccgaactgctttcgcgcgtttcc
gctgccgtgacgcgcaaccaggccggacgtggtacgcgcgtcgccttcctcaaaccggaa
gtctccacctatgacgcgttcttccaaaccatcgtgcgccaatacggcctgctcgtcggc
ttcgaccaaaacacgcagccattgagcgaagccggagcgctgcagctcatccacaccgtg
ctcgacaagcacatggaccagctcatggccttcgaccaaggcggcgacgaactcggcaaa
ttctccaccatcgccggcaacgtgttcaccctatccaacgccatcgcaggagccatgatc
ggcagcgactgcaccagcttcgacgaagccgtggaacgcgtgcgcgcatgggataaggcg
ttcgtggcgcaagtggccaaagcgcttgaagacgaggacgttcccgatgacgagccgaaa
gtgggcaaggctccgaaacagaagaaaaaggaatccgacaccgccttcgaagcgcgcaaa
cgcgaataccgcgcccaatgccaccaactgtgcgtccacaagaccgcgaagttggccggc
acggcccgcaaacgcgacctgctactcgacctcgtggccgactaccacgccgaaaaacgc
gccctcaacatggccgaattcagcgacttcaccatcgccgcattccaactcgtcacccga
ttcccctccatcggagccacctaccgcaaacgctacacgcacgtgctgcttgacgaatac
caagacacctccaccacgcaggcggccctcctgaccgcactgttccacgccgattccacc
catcgcagcgcggtgaacgccgtcggcgaccccttccaatcgatctacgcatggcgagga
gccagcccaggcgcattccgcatgctgcaacacgacttcggccacgacgccaccgacaag
ccctacacgctgaccgtcacccgacgtaactcgcgcatggtgctcgaagcggccaacaat
ctgacgaaaccattgcgcctgcccgccagacgtcgcggcagctcgcttatgcgcgaagtg
gacgtgcccccgctcgccaacatcgacaatgcccccgaaggtacgctcggcgtgctcggc
tacgccacattcggccaggaaatcgacgccatcgtacgcttcgccaaacaagcgatcgca
ctgcacacgccaaccgaaaacgagctcgccgacggagccaaagacaaccgtccgcacgtg
gcgctcctgttccgctccaaaacgcagatgccagcctacgaggacgcactggaacaagcc
ggcctcaccacactcgtcgtcggccaggccgcactcctggaacgtcccgaaatcaaagac
atcctcgccctgctgcacgtcgtatgcgaccacaccgacagcgccgcgctcatgcggctg
ctcgccacgccacgattcggtctgtccgccgacgatctgcaggcgctcgccggcatcgcc
gaacggctcaacaccgcgcaacgctaccgcgcgctcgtgtcggccggcatcgtggaggcg
gatgcgaatccgtccgacgccgacatccgcgccaccgtgcgcgcctaccgcgaccaagtg
cccaacgccgtcttcctgatcgacgtgctgctgcgcggcgatctgcggcacctcgtcgac
ggcgtattgagccgtacgggagccgcgagcgtcatccacgccggtcgcgtcatccaacag
gtgcagcgcacggccggccatccgttgccggaagtggtacgcacggccatcaccgcgctc
ggactggacatcgacctgctgctcgccgaacggatgcggcatccggatgccggcaatcgt
gtcacatcgcatgccgcttcgtcactcgacgcgatgctgtctctggtggacacctacttg
caggaaatcgccgcgcagggcacgccaagcctgcgcgcgttcatctcgtgggtggattcg
ctgcgtgacgcgtccgacgacaacgccaccgcaccagatacccccgtcgatgtggtgctc
atgaccgtgcaccagtcgaaaggcctggaatgggacgccgtggccgtggtcggcatgcgc
gacggcaccttcccgtccagtcaaggcgaccgcctgagcgtcaaaacggacgaagaccat
ccgggcggtcggcgcgacggcgtatgggagccgccggaatacttcgaaaaagcccacact
tggctggaagacccgtccgcggtgccggttccggtgcgcgccgacgcggatatcctgcca
cgattcccgcacgacgcgcccatcgggggcaatcccgtggaatcgctcgacggattggac
gatgcggaagtgatcgacgacgaggtgttcggcaccttgcgaaccatggccgtcgacgat
atggaaggaatggatccggcaagcctgtacctgacgcaacaggaggaatacggccgccga
ctgcacgccgacgaacgccgtctcgcctacgtggcgttgacgcgcgcccgctacgaggcg
ctgctcgtatacagcggatgcaacgagacgagccgcgactcccgcctggcggagggaaag
aaaagcgccgcgccgtcgaatttctggctggagacgcgcgattcgatgaacggaatcgtc
accgcggtacgcgaaccggacaacctgtccgacgatgtggacggctccccgcacacgctg
ggacttgacctgcccgacggctatttcgtaggcgaacacgcccgcgatttcgagaatgcc
gtggtgggcgatgcgtggaacacgccgctcgaaccggtctcggacgaccatactttgcct
tggccgtgcgatctgagcgccgatgtcgccgacaagctgcgtgccgcggccgaacaggta
cgtgccgtcgaatccgacgaaccgaatatcgctgaatccacgggaacgcagggcgacgtt
gccgatgaatccgccacgccatcgccggaaaccggaaactcactgctgcgtctcgccaaa
ctgctcgtcgccgacgaacatctcatgccggaaccggacgcggctgacgcaggcgaatcg
caggacgccttcgacgaggccgtgcgtgccaaaggcgaacgtatccttgctgccggccgc
caaaacgtcacctcgctgcaagcgcgcgccggctccatgggcgagcgtgactcccgcgcc
tactggcgtggtctggtccgtccgattccgcacgtcgcctcgccggcggcacagctcggc
acgcggttccacgcatgggctgagcgtttcatcatggcggatgcggacgtcgacggcatc
ggtggtacggaaggtgctgccggtatggccgcgcagtcgcgtgcggaactgatcgcattg
ataggtgatacgcaagtcgacgcggacaacggcggcgtgcaatcgcaggacgcaccatcg
caggacgcccaattgcgagacgaacggaaactggccgcttggcagcgtcgtcttgtcgct
tcgccgtgggcaaaacgacgtccagcatgggcggaacgccagctcgtcgtcgacatgtcc
cagctcggcaccatcgtcaacggcaaactcgacgcggtgttcttcggcggtctcgacgaa
acggacgagatgaaacgctacaccgtggtcgattggaaaaccggcgtaaaaccacgcaaa
ccggacgaaatcaaggagaagctcgcacagctcgacctgtaccgcctgctgctcgcggcg
atggaaggggtgccgttggatgcaatcgacgcctgtctctactatgtgagtgagcctcac
gaggccgatcgggagcttgacgccctcgacaaaacagaagaagagatccttgccgagttg
agctacggaattccgcagcaatccgacaacgactag
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