Bifidobacterium adolescentis JCM 19861: B19861_15630
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Entry
B19861_15630 CDS
T09745
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bfj
Bifidobacterium adolescentis JCM 19861
Pathway
bfj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bfj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B19861_15630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfj03021
]
B19861_15630
03400 DNA repair and recombination proteins [BR:
bfj03400
]
B19861_15630
Enzymes [BR:
bfj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B19861_15630
Transcription machinery [BR:
bfj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B19861_15630
DNA repair and recombination proteins [BR:
bfj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B19861_15630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
BEK83621
LinkDB
All DBs
Position
complement(1765401..1768961)
Genome browser
AA seq
1186 aa
AA seq
DB search
MAEATTNTTTIIARADQHDIDLHKASDRVNFGSIREPIDVPYLLGVQTDSFDWLIGNERW
QKRVQEDLENGTNTVPHTSGLDEVFQEISPIENFAQTMSLTFSDPYFEEPRHTVQECKEK
DYTYSAPLYVNAEFENGDTGEIKSQTVFMGDFPLQTPHGTFIIGGTERVIVSQLVRSPGV
YFDRSQDRTSDKEVFGAKIIPSRGAWLEFEIDKRDVLGVRVDRKRKQSAIVFLMAIGMTK
DEIADAFKDYPLVMDALVKETVQTQDEALTDLYRKIRPADTPTPEAGKNLLDSFYFNTKR
YDLARVGRYKINRKLGLEKDINDRSLSREDIIATIKYLVTLHAGDTKFPGKRDGKDVDLR
VDVDDIDHFGNRRIRQVGELIQNQLRTGLSRMERVVRERMTTQDPEAITPQSLINIRPVN
ATIKEFFGTSQLSQFMDQNNPLAGVTNKRRLSALGPGGLSRDRASMEVRDVHPSHFGRMC
PIESPEGPNIGLIGSLATFGRINPFGFIETPYRKVVNGHVTDEVEYMTADRDAEHVIAQA
NQELDENGNFVKKQALARVGEEEAVDVPVSSVDYMDVSPRQMVSVGASLIPFLEHDEGHR
ALMGTNMQRQAVPLIESERPLVGTGAEWRAAVDSGDVILAEKPGVVTYVSADIIRTMNDD
GTTSSYKLAKFQRSNQTTCYNQVPLIHDGERVEAGTVLADGPATQKGEMALGKNLLIAFM
PWNGYNYEDAVIISQRLVQDDTLSSIHIEEYEIDARETKLGAEEITRDLPNVGEDAVANL
DERGIIRIGAEVEAGDILVGKVTPKGETELTPEERLLRAIFGEKSREVRDTSLRVPHGET
GTVIAVKEITREDAEEDGDELPNGVNQMIRVYIAQHRKITQGDKLSGRHGNKGVISRILP
EEDMPFLADGTPVDIMLNPLGVPSRMNLGQVLELHLGWIAHAGWDISLDPDAEAAWKKYV
PQGAEKGAPGTPVATPVFDGVRPETIKGLLSCTLPDRDGNKLVGPDGKATLFDGRTGEPF
PKPISVGYMYMLKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAY
GAAYTLHEMMTTKSDDVDGRVRVYGAIVKGENLPPAGIPESFKVLLKEMQSLSLNVEVLN
AEGVAIDMKDEDDDPSTSSDDLGFNIGARPDAAAKEDQVAEEPEFQ
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
ttggctgaggctacgacgaacaccaccaccatcatcgcacgcgccgaccagcatgatatt
gatctgcacaaggcgtcggaccgtgtgaatttcggctccatccgcgagcccattgatgta
ccctacctgttgggtgtacagactgacagctttgactggctcatcggcaacgagcgctgg
cagaagcgagtccaggaggatctggagaacggcaccaacaccgtgccgcacacctccggt
cttgatgaggtcttccaggagatctccccgatcgagaacttcgctcagaccatgagcctg
accttctccgatccgtacttcgaagagccgcgccacaccgtgcaggagtgcaaggagaag
gattacacctactccgcaccgctgtacgtgaacgccgaattcgaaaacggcgacaccggc
gaaatcaagtcccagaccgtgttcatgggcgatttcccgctgcagaccccgcacggcacc
ttcatcatcggcggcaccgagcgagtgatcgtgtcccagctcgtgcgttccccgggcgtg
tactttgaccgctcccaggaccgtacttccgataaggaagtcttcggcgcgaagatcatc
ccgagccgtggcgcatggctcgagttcgagatcgacaagcgcgacgtcctcggcgtgcgc
gtggaccgcaagcgcaagcagtccgccatcgtgttcctcatggccatcggcatgaccaag
gatgagatcgccgacgctttcaaggactacccgctggtcatggacgcgctcgtcaaggag
accgtgcagacccaggacgaggccctgaccgacctgtaccgcaagatccgtccggctgac
accccgaccccggaagccggcaagaacctgctggactccttctacttcaacaccaagcgt
tacgatctggcccgcgtcggccgttacaagatcaaccgcaagcttggtctggaaaaggac
atcaacgaccgcagcctgtcccgcgaagacatcatcgccaccatcaagtacctggtcacc
ctgcatgcgggcgataccaagttcccgggcaagcgcgacggcaaggacgttgacctgcgc
gtggacgtcgacgatatcgaccacttcggcaaccgtcgtatccgccaggtcggcgagctg
atccagaaccagctgcgcaccggcctgagccgtatggagcgtgtggtccgcgagcgtatg
accacccaggatccggaggccatcaccccgcagtccctgatcaacatccgtccggtgaac
gccaccatcaaggagttcttcggcacttcccagctgtcccagttcatggaccagaacaac
ccgctggctggcgtgaccaacaagcgtcgtctgtccgctctgggccccggtggcctgtcc
cgcgaccgcgcctccatggaagtgcgcgacgtgcacccgtcccacttcggccgtatgtgc
ccgatcgaatctcctgaaggcccgaacatcggtctgatcggctctctggcaaccttcgga
cgcatcaacccgttcggtttcatcgagaccccgtaccgtaaggtcgtcaacggccacgtc
accgacgaagtcgagtacatgaccgcagaccgcgatgccgagcacgtcatcgcccaggcc
aaccaggagctcgacgagaacggcaacttcgtcaagaagcaggcccttgcccgagtcggc
gaagaggaagcggtcgatgtgccggtcagctccgtcgattacatggacgtctccccgcgt
cagatggtttccgtcggcgcctccctgattccgttcctggagcacgatgagggccaccga
gcgctgatgggcaccaacatgcagcgtcaggccgtgccgctgatcgaatccgagcgtccg
ctcgtgggcaccggcgccgaatggcgcgccgccgtcgattccggcgacgtcatcctggcc
gagaagccgggcgtggtgacctacgtgtccgccgacatcatccgtaccatgaacgacgat
ggcaccaccagctcttacaagctggccaagttccagcgctccaaccagaccacctgctac
aaccaggtcccgctcatccacgacggcgaacgcgtggaagccggcaccgtgctggccgat
ggtccggcaacccagaagggcgagatggcactgggcaagaacctgctcatcgccttcatg
ccgtggaacggctacaactacgaggatgctgtgatcatctcccagcgcctcgtgcaggac
gacaccctgagctccatccacatcgaggagtacgagatcgacgcccgcgaaaccaagctg
ggtgccgaagagatcacccgcgacctgccgaacgtcggcgaggacgcggtggccaacctc
gacgagcgtggcatcatccgcatcggcgccgaagtcgaagccggcgacattctggtcggc
aaggtcaccccgaagggcgagaccgagctgactccggaagagcgtctgctgcgcgccatc
ttcggtgagaagagccgcgaggtgcgtgacacctcgctgcgcgtgcctcacggcgagacc
ggcaccgtcatcgcggtcaaggaaatcacccgcgaagacgccgaggaagacggcgacgaa
ctgccgaacggcgtgaaccagatgattcgcgtctacatcgcacagcaccgtaagatcacc
cagggcgacaagctctccggccgtcacggcaacaagggcgtcatctcccgcatcctgccg
gaagaggacatgccgttcctcgccgacggtactccggtcgacatcatgctgaacccgctg
ggcgtgccttctcgaatgaaccttggccaggtgctggaattgcacctcggctggatcgcg
cacgccggctgggacatctccctcgacccggatgccgaggccgcttggaagaagtacgtg
ccgcagggcgccgaaaagggcgctccgggcactccggtggccaccccggtgttcgacggc
gtccgtccggaaaccatcaagggcctgctcagctgcacccttccggaccgcgacggcaac
aagctcgtcggccccgacggcaaggcgaccctgttcgacggccgtaccggcgaaccgttc
ccgaagccgatctccgtgggctacatgtacatgctgaagctgcaccacctggtcgacgac
aagatccacgcccgctccaccggcccgtactccatgatcacccagcagccgctgggcggc
aaggctcagttcggtggacagcgcttcggcgagatggaagtgtgggccctcgaggcctac
ggtgccgcctacacgctgcacgaaatgatgaccaccaagtccgatgacgtcgacggccgc
gtgcgcgtctacggcgccatcgtgaagggcgagaacctgccgccggcaggcatcccggag
tccttcaaggtgctgcttaaggaaatgcagtccctgtccctgaatgtcgaagtgctcaac
gccgaaggcgtggccatcgacatgaaggacgaggatgacgatccgtccacttcctccgat
gacctcggcttcaacatcggcgcgcgtcctgacgccgccgccaaggaagaccaggttgcc
gaggagcccgaattccagtga
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