Bifidobacterium fermentum: QN062_00125
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Entry
QN062_00125 CDS
T10739
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
bfk Bifidobacterium fermentum
Pathway
bfk00220
Arginine biosynthesis
bfk00240
Pyrimidine metabolism
bfk00250
Alanine, aspartate and glutamate metabolism
bfk01100
Metabolic pathways
bfk01110
Biosynthesis of secondary metabolites
bfk01240
Biosynthesis of cofactors
Module
bfk_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
bfk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
QN062_00125 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
QN062_00125 (carB)
00220 Arginine biosynthesis
QN062_00125 (carB)
Enzymes [BR:
bfk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
QN062_00125 (carB)
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Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_3
ATP-grasp_2
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
XDS50666
UniProt:
A0AB39UJZ2
LinkDB
All DBs
Position
28431..31823
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AA seq
1130 aa
AA seq
DB search
MPKRSDIHSVMVIGSGPIVIGQAAEFDYSGTQACRVLREEGIRVILVNSNPATIMTDPEM
ADATYIEPIDTSILEKIIAKERPDALLPTLGGQTALNAAMALGEAGILKKYDVELIGASL
DAIDRGEDRDLFKKVVDKAGAESARSLIAHSMDEAEAAADDLGYPLVVRPSFTMGGLGSG
IAHNVEELHRIAGAGMHYSPTHEILLEEGIEGWKEYELELMRDKNDNVVVICPIENVDPV
GVHTGDSTTVAPILTLTDREYQKMRDVGIKIIRGVGVDTGGCNIQFAVHPETGRLIVIEM
NPRVSRSSALASKATGFPIAKIATKLALGYTLDEIQNDITQSTPASFEPTIDYVVTKIPR
FTFEKFPNADTTLTTSMKSVGEAMALAGNFRESLGKALRSIDKRHMNFSWDGGKPSADEV
SQLLRDMSRPTEHRYLQVQRAMWGGASVEQIYAATKIDRWFLEQIREMNEVAMRVQQAES
LGGPLLREAKQSGLSDLQIAHLRNLGDEGENAVRELRWNYGLRPVYKTVDTCAAEFDAVT
PYYYSCYADESEIRPRSREAVIILGSGPNRIGQGIEFDYTCVHAVQELGKKYDTIMINCN
PETVSTDYDMSDRLYFEPLTFEDVLEVYAAEKKMGPIKGVIVQLGGQTPLSLAARLKAAG
VPILGTSPEAIDLAENRELFGEVLKREGLNAPRYGTALSFEEAQDAAHSIGYPVLVRPSY
VLGGRGMEIVYDDSQLKTYVNKALDEAKADTVVSGRLPSPLLIDKFLQDAIEIDVDAIYD
GTDLYIGGIMEHVEEAGVHSGDAACTLPPSTLSDDQMERLREATLSIARGCDVRGLINVQ
YAYMANTLYVIEANPRASRTVPFASKATGTALAKAAARIMTGETIEDQRRNGLLLPVGDG
GMIRRGQPVAVKESVLPFKRFRTTVGRTVDIILGPEMRSTGEVMGFDRDFPHAFAKSQLA
AYAGGLVTEGNVFLSVNDSDKRQLPLMAQRLHEFGFNLYATEGTASVLRRYGLEANVVAK
LGTRVDTPQPMTDGSKDSEGSSDKGEKNVVDLIEDGTINMILNTPNSKGSRSDGYSIRAA
AIAADLPHFTTITEFSAALMAIEAVRRNDYQIESIQERAEQIHELERQDS
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgctccgacatccattcggttatggtcattggctcagggccaatcgtcatt
ggtcaggcagcagagttcgactattcaggaacgcaggcatgtcgtgtgttgcgcgaagag
ggaatccgcgtgattctggtcaattccaatcctgcaacgatcatgactgaccctgaaatg
gcagatgccacatacatcgagccaatcgacacatccatacttgagaagatcatcgctaag
gagcggccagatgcgcttctgccgacacttggtggacagaccgcgctgaatgccgcgatg
gctctgggcgaggcaggaattctcaagaagtatgacgtcgagctcataggcgcatcgctt
gacgcgatcgatcgtggcgaggatcgcgacctgttcaagaaggtcgtcgacaaggctggt
gcggagtcggcccgctcactcatcgcccacagcatggatgaggcggaggcagctgccgat
gaccttggctatcccttggtggttcgcccaagctttacgatgggcggtctcggatcgggc
atcgcccacaacgtcgaggagcttcatcgcatagcgggtgcaggcatgcattactcacca
acccacgagatactcttggaagagggcatcgagggctggaaggaatatgagcttgagctg
atgcgcgacaagaacgacaacgtcgtggtgatctgccccatagagaatgtcgatcctgtc
ggcgtccacaccggggattcgacgaccgttgcccccatcctcacgcttacggaccgtgaa
tatcagaagatgcgcgatgtcggcatcaagatcatccgtggcgtaggcgtcgacactggc
ggctgcaacatacagttcgccgttcatccggagaccggccgacttatcgtcatagagatg
aacccacgcgtgtcacgctcctccgcactcgcttcgaaggcgaccggattccccatagca
aagatcgccaccaagctcgcccttggctataccttggacgaaatccagaacgatatcacg
cagtcgaccccggcgagcttcgaaccgaccatagactatgtcgtgaccaagattccgcgc
ttcacctttgagaaattcccaaatgccgacacgacgctcaccacttcgatgaaatccgtt
ggtgaggcaatggcacttgcaggtaatttccgcgagtctctgggcaaggcgctacgctcg
attgacaagcgccacatgaacttttcatgggatggcggcaagccctcggccgatgaggtc
agtcagctgctgagagacatgagtcggccaaccgaacatcgctatctgcaggtgcagcgc
gcgatgtggggcggtgcgagcgtcgagcagatctatgctgcgaccaagatcgaccgttgg
ttccttgaacagatcagggaaatgaatgaagtcgccatgcgcgtgcagcaggccgaaagc
cttggcggccctctgctccgggaggccaagcaatcgggtctcagcgacctgcagatcgcc
catctgaggaatcttggggatgagggtgagaacgcggtccgcgaattgcggtggaactat
ggcctgcgaccggtatacaagaccgtcgacacatgtgccgcggaattcgacgcagtcacg
ccatattactattcatgctacgccgacgagtcggagattcgtccaagaagccgcgaggcg
gtcataatccttggatccggtcccaacagaatcgggcagggcatcgagttcgactacaca
tgcgtccatgccgttcaggaactcggcaagaaatatgacacgatcatgatcaactgcaat
cctgagaccgtttcgacggattacgacatgtcagaccggctgtatttcgagccacttacc
ttcgaagacgttcttgaagtgtatgcagccgaaaagaagatgggtcccatcaagggagtc
atcgtgcagctcggaggtcagacgccgctttccctcgctgccagactcaaggctgccggc
gttccgattctcggcacgtccccggaggcgatcgatctggctgagaaccgtgagcttttc
ggcgaggtgctcaagcgtgaaggcctgaacgccccacgctatggaacggccctgtccttc
gaggaagctcaggatgccgctcacagcatcgggtatccggtcctggtgaggccatcctat
gttctcggcggccgtggtatggagatcgtgtatgacgattcccagctgaagacctacgtc
aacaaggcgctcgatgaggcaaaggcggatacggtcgtgtccgggcgactgccatcgccg
ctgctcatcgacaagttccttcaggatgcgatcgaaatcgatgtcgatgcgatatatgac
ggaaccgacctctatatcgggggcatcatggagcatgtcgaggaagcgggcgtccattcg
ggcgatgcggcctgcacattgccgccaagcacgctttccgacgaccagatggaacggctg
cgcgaggccacgctctccattgcgcgtggatgcgacgttcgtgggctgatcaacgttcag
tatgcgtacatggcgaacaccctgtatgtcatcgaggcgaatccacgcgcatccagaact
gtcccattcgcatcaaaggcgaccgggaccgctctcgcgaaggctgccgcgcgcatcatg
accggggagaccatcgaggaccagcgcaggaacggcttgctgctgccagtaggggatggc
ggcatgattcgtcgcggccagccggttgcggtcaaggaatcggtattgccgttcaagcga
ttcagaacgacggtcggacgaacggtcgatatcatcctcggacctgagatgcgttcgact
ggtgaggtcatgggcttcgaccgtgacttcccccacgccttcgccaagagccagctcgca
gcatacgctggcggtctggtcaccgaggggaatgtattcctgtccgtgaatgacagcgac
aagcgtcagctcccattgatggcacagcgtctgcatgagtttggcttcaatctctatgcg
accgagggcacggcatcggtgctgcgcaggtatggcctggaggcgaatgtcgttgcgaag
ctgggcacgcgcgtcgacacgccgcagcccatgactgacggctcgaaggattccgagggc
tcctctgacaagggtgagaagaacgtcgtcgatttgatcgaggatggcaccatcaacatg
attctcaacaccccgaattcaaaggggtcgagatctgatggctattccattcgtgccgct
gcaatcgcggccgacctgccacatttcaccacgataaccgaattctccgccgcgctgatg
gcaatcgaggcagtgcgcaggaacgactatcagattgagagcatccaggaacgcgcggag
cagattcatgagctcgagaggcaggacagctga
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