Bifidobacterium fermentum: QN062_00295
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Entry
QN062_00295 CDS
T10739
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bfk Bifidobacterium fermentum
Pathway
bfk00470
D-Amino acid metabolism
bfk00550
Peptidoglycan biosynthesis
bfk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bfk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QN062_00295 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QN062_00295 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bfk01011
]
QN062_00295 (murD)
Enzymes [BR:
bfk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
QN062_00295 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bfk01011
]
Precursor biosynthesis
Amino acid ligase
QN062_00295 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
XDS50696
UniProt:
A0AB39UK21
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All DBs
Position
73978..75408
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AA seq
476 aa
AA seq
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MVVDNATVLVAGLGISGKSSCAVLAGRAHRVITVDEHKAEADLHGFEDIPWDSIDLVVTS
PVFNPRTPFILEAQRRSIPVVSEVELAWRLRVPSVATGEPAPWIGITGTNGKTSTTEMTS
AMLSDSGFVAPAVGNIGKAVSLAAVDPSNQALCVELSSFQLHFTSSLRLTCAAITNLADD
HLDWHGGFARYAADKAKVYRGVTKTLVYNADDSRVTELAEAAHPAPGCRKVGFTLKPPVR
GQIGVEDGWIVDSSGVVNGTESPVRVAKVSEFRHMCEPDGTVYPHLVADSLCALALALGF
GVAVQDAIAALRNFTPGGHRIQTVATAQLTDGSIRFVDDSKATNAHAAAASLSSFADRSV
VWVAGGLAKGAQFEGLVRDQKTKIKAAVIIGKDQRAFQEAFASSAPQIPTTLIDPEDNES
VMRRAVDACGSYAAAGDVVLMAPACASMDQFVSYADRGDQFRKQASRWVLEHAQNN
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggttgttgacaatgcaacggttttggttgcaggactggggatctcgggaaaaagttcg
tgtgccgtgctggctggccgcgcacatagggtgatcacggtcgatgagcacaaggccgag
gcggatctgcatggtttcgaagacattccctgggattcgattgaccttgtggttacctcg
ccggtattcaaccctcgcaccccgttcatcctcgaggctcagcgacgttccattcccgtc
gtgagcgaggtcgagctcgcatggcggctcagggtgccttcggtcgcgacgggagagccc
gcaccatggattggcattaccgggaccaacggaaaaacgtcgaccactgagatgacctcc
gcgatgctgagtgattcaggcttcgtcgctcctgcggtaggcaatatcggcaaggccgtt
tcccttgccgcggtcgacccatccaatcaggccctatgcgtcgagctgagttcgttccag
cttcatttcaccagttcgctgagactgacctgcgctgcgatcacgaatcttgccgacgac
catttggactggcacggtggatttgcgcgctatgccgcagataaggcgaaggtgtatcgt
ggcgtgacgaaaaccttggtctataacgccgatgacagcagggtcactgagctggccgaa
gcggcacatcccgctccgggatgcagaaaggtcggattcaccctcaagcctcccgtcaga
ggtcagataggggtcgaggacggttggatcgtggactcgagcggtgtggtcaatggcacg
gagtccccagtcagagtcgcgaaggtcagcgagttcagacacatgtgcgagcctgatggc
actgtctatccgcatctggttgcggattcgctctgcgccttggctcttgcactcggattc
ggcgttgcggtgcaggatgcaatcgccgcattgaggaatttcactccgggaggtcaccga
attcagacggttgcgactgcgcagctcaccgatggcagcattcgcttcgtcgacgattcg
aaggcaacgaatgcgcatgcggctgccgcgtcgctctcaagctttgccgatcgcagcgtc
gtatgggtcgctgggggactggcgaagggtgctcagttcgaagggcttgtcagagatcag
aagacgaagatcaaggccgcggttatcataggcaaggatcagcgggccttccaggaggca
ttcgcctcttcggcgccgcagattcctacgacgctgatcgatcctgaggacaacgaaagc
gtcatgcgccgcgcagtggatgcctgcggctcatacgcggctgccggcgacgtcgttctg
atggctccggcgtgcgcttcgatggatcagttcgtctcatacgcagacaggggagaccag
ttcaggaagcaggcatcgcgttgggttctggaacatgcccagaataactag
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