KEGG   Bifidobacterium fermentum: QN062_01310
Entry
QN062_01310       CDS       T10739                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
bfk  Bifidobacterium fermentum
Brite
KEGG Orthology (KO) [BR:bfk00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    QN062_01310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfk03021]
    QN062_01310
Transcription machinery [BR:bfk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     QN062_01310
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 DprA_WH Nop14
Other DBs
NCBI-ProteinID: XDS51532
UniProt: A0AB39UEN0
LinkDB
Position
329484..331034
AA seq 516 aa
MATKDTAEKTVRTQTSSTATEEKTKKTRAKRVTKPRTRAAASAGSSSRRKSRSIPSTSER
SEKSTLAHDADVADGQGIAKGLDEDVANDNTGTPETGTDETNAAEEDIDLDDDTLDDDSD
DDSDDDSDDDSDSDDDSNDDSDDDSDDDASDDDDSNDDDSNGSHASGHGHRSRRSPRIPV
IKAKGAFVVSDSDDDENITPSGNPKRRVIATGATADPVKDYLKQIGRVSLLNAEQEVDLS
ERIEAGLYAQHLLENDAEGMDFKRKRELKWAASDGKKAKDHLLEANLRLVVSLAKRYTGR
GMLFLDLIQEGNLGLIRAVEKFDWKKGFKFSTYATWWIRQAITRAMADQARTIRVPVHMV
EVINKLSRVQRQMLQDLGREPTPDELARELDMPVEKVQEVQKYGREPISLHTPLGEDGDS
EFGDLIEDTDAIAPSDAVAFSLLQEQFRQVLETLSPREAGVIKMRYGLEDGQPKTLDDIG
RVYGVTRERIRQIESKTMSKLRHPSRSQTLRDFLDQ
NT seq 1551 nt   +upstreamnt  +downstreamnt
ttggccacaaaggatacggctgagaagacggtacgcacacagacttcgagcacggcaacc
gaggagaaaaccaagaaaacccgggccaaacgagtcacgaagccacgaaccagggcggcg
gcgtctgcagggtcgtcttcccgtcgcaagagccggtcgattccatccacatccgagcgc
tcggaaaagtcgacgctcgcgcatgatgccgatgtggctgacgggcagggcattgccaaa
ggcttggacgaggacgtagccaacgacaataccggcactccagaaactggtaccgatgag
accaacgccgccgaagaagatatcgatctggatgacgacacgctagacgatgattcggat
gacgattctgatgatgactcggatgacgattctgattcggatgacgactcaaacgatgat
tctgacgatgattccgatgatgatgcttcggacgacgatgattcgaatgatgacgattcg
aatggctcgcacgcgtccggacatggacatcgttcacgtcgttccccccgcatccctgtg
ataaaggcgaagggtgccttcgtcgtaagcgattctgacgacgatgagaacatcacgcca
tcgggaaaccctaagcgccgtgtcatagcgaccggtgcgaccgctgatcccgtgaaggat
tatctgaagcaaatcggccgcgtgagcctgctcaacgcggaacaggaggttgacctttcc
gaacgcatcgaggccggtctgtatgcgcagcatcttcttgagaacgatgccgagggaatg
gatttcaagcgcaagagggagcttaagtgggctgcctctgacggaaagaaggccaaggat
catctgctcgaagccaaccttcgacttgtcgtgtcccttgcgaaacgatataccggccgc
ggaatgctcttccttgacttgatccaggagggcaatcttggtcttatccgcgcagtggaa
aagttcgattggaagaagggcttcaagttctccacgtatgcgacctggtggattcgtcag
gcaataacccgagccatggcggatcaggctcgaaccatccgcgtgcctgtccacatggtc
gaagtcatcaacaagctgtcgcgcgtccagcgtcagatgcttcaggacctgggccgtgag
ccgactcctgacgaattggcccgtgaacttgacatgccggtcgaaaaggttcaggaagtt
cagaaatatgggcgtgagccaatctctctccatactcctctgggcgaggacggcgattcc
gaattcggcgacttgatcgaggacacggatgcgatcgcaccttctgatgcagtggcattc
tcgctgcttcaggaacagttccggcaggtgctcgagacgctgagccctcgtgaggcaggc
gtcatcaagatgcgctatgggctcgaggatgggcagcccaagacccttgatgacatcggc
cgcgtatacggcgtgacacgtgagcgcattcgtcagatcgaatccaagacgatgtcgaag
ctgcgtcatccgtctcgttcgcagactctgcgtgacttcctcgaccaatga

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