Bifidobacterium fermentum: QN062_01310
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Entry
QN062_01310 CDS
T10739
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
bfk Bifidobacterium fermentum
Brite
KEGG Orthology (KO) [BR:
bfk00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QN062_01310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfk03021
]
QN062_01310
Transcription machinery [BR:
bfk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QN062_01310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DprA_WH
Nop14
Motif
Other DBs
NCBI-ProteinID:
XDS51532
UniProt:
A0AB39UEN0
LinkDB
All DBs
Position
329484..331034
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AA seq
516 aa
AA seq
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MATKDTAEKTVRTQTSSTATEEKTKKTRAKRVTKPRTRAAASAGSSSRRKSRSIPSTSER
SEKSTLAHDADVADGQGIAKGLDEDVANDNTGTPETGTDETNAAEEDIDLDDDTLDDDSD
DDSDDDSDDDSDSDDDSNDDSDDDSDDDASDDDDSNDDDSNGSHASGHGHRSRRSPRIPV
IKAKGAFVVSDSDDDENITPSGNPKRRVIATGATADPVKDYLKQIGRVSLLNAEQEVDLS
ERIEAGLYAQHLLENDAEGMDFKRKRELKWAASDGKKAKDHLLEANLRLVVSLAKRYTGR
GMLFLDLIQEGNLGLIRAVEKFDWKKGFKFSTYATWWIRQAITRAMADQARTIRVPVHMV
EVINKLSRVQRQMLQDLGREPTPDELARELDMPVEKVQEVQKYGREPISLHTPLGEDGDS
EFGDLIEDTDAIAPSDAVAFSLLQEQFRQVLETLSPREAGVIKMRYGLEDGQPKTLDDIG
RVYGVTRERIRQIESKTMSKLRHPSRSQTLRDFLDQ
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
ttggccacaaaggatacggctgagaagacggtacgcacacagacttcgagcacggcaacc
gaggagaaaaccaagaaaacccgggccaaacgagtcacgaagccacgaaccagggcggcg
gcgtctgcagggtcgtcttcccgtcgcaagagccggtcgattccatccacatccgagcgc
tcggaaaagtcgacgctcgcgcatgatgccgatgtggctgacgggcagggcattgccaaa
ggcttggacgaggacgtagccaacgacaataccggcactccagaaactggtaccgatgag
accaacgccgccgaagaagatatcgatctggatgacgacacgctagacgatgattcggat
gacgattctgatgatgactcggatgacgattctgattcggatgacgactcaaacgatgat
tctgacgatgattccgatgatgatgcttcggacgacgatgattcgaatgatgacgattcg
aatggctcgcacgcgtccggacatggacatcgttcacgtcgttccccccgcatccctgtg
ataaaggcgaagggtgccttcgtcgtaagcgattctgacgacgatgagaacatcacgcca
tcgggaaaccctaagcgccgtgtcatagcgaccggtgcgaccgctgatcccgtgaaggat
tatctgaagcaaatcggccgcgtgagcctgctcaacgcggaacaggaggttgacctttcc
gaacgcatcgaggccggtctgtatgcgcagcatcttcttgagaacgatgccgagggaatg
gatttcaagcgcaagagggagcttaagtgggctgcctctgacggaaagaaggccaaggat
catctgctcgaagccaaccttcgacttgtcgtgtcccttgcgaaacgatataccggccgc
ggaatgctcttccttgacttgatccaggagggcaatcttggtcttatccgcgcagtggaa
aagttcgattggaagaagggcttcaagttctccacgtatgcgacctggtggattcgtcag
gcaataacccgagccatggcggatcaggctcgaaccatccgcgtgcctgtccacatggtc
gaagtcatcaacaagctgtcgcgcgtccagcgtcagatgcttcaggacctgggccgtgag
ccgactcctgacgaattggcccgtgaacttgacatgccggtcgaaaaggttcaggaagtt
cagaaatatgggcgtgagccaatctctctccatactcctctgggcgaggacggcgattcc
gaattcggcgacttgatcgaggacacggatgcgatcgcaccttctgatgcagtggcattc
tcgctgcttcaggaacagttccggcaggtgctcgagacgctgagccctcgtgaggcaggc
gtcatcaagatgcgctatgggctcgaggatgggcagcccaagacccttgatgacatcggc
cgcgtatacggcgtgacacgtgagcgcattcgtcagatcgaatccaagacgatgtcgaag
ctgcgtcatccgtctcgttcgcagactctgcgtgacttcctcgaccaatga
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