KEGG   Bifidobacterium fermentum: QN062_03085
Entry
QN062_03085       CDS       T10739                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
bfk  Bifidobacterium fermentum
Pathway
bfk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bfk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    QN062_03085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bfk03400]
    QN062_03085
Enzymes [BR:bfk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QN062_03085
DNA repair and recombination proteins [BR:bfk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     QN062_03085
SSDB
Motif
Pfam: PriA_3primeBD
Other DBs
NCBI-ProteinID: XDS51180
UniProt: A0AB39UGL2
LinkDB
Position
complement(770344..772626)
AA seq 760 aa
MADSDAEQLALDGLAPRRRRRRTPAQRIAAERNPIAQVILDVQATQLGDTFDYLVQAKDD
DAALPGVRVRVRFGRQLLFGFIWNRVQTSAVPPSTLRFIERVVSPSIAVSEQGRMDITDI
ARAYGGTRANILRMAVPPRVARVDAEQRLVTGRFAIGMSEPMKRDMRAWCDRRFESLRAS
YDHVEEVRRSLAAHAGSSFVWNVLPGVLRWARDASWTLMEALLLGKSAVMVLPDMRHVQD
LSEVLQEAGLRPFAPAKGSQGAWDGDFAVLGAALPPEERYRAFQAVASGQVRCVIGTRAV
MYAPVEGSGVFAIMDDNAYQNADGFMPYAHARGVLRLRARNHRGTFIDFSAVRSPMSQWE
ILDGSHEGNAVCGTSVNVQGLRTATQEQSPWIRWLNHEELSRLADLAIGARVPHTAVSVI
QRALKLGPVLLSIPREHAVDVLCCTKCHRQARCNRCTGPLHADTHAGRVAHCLWCGAAAV
DWKCTNCGNEGMRVLRVGAQGTAAELRGLFRNVPIVLSTPLQPRGIVTDIADRPQIVIAT
PGAEPRIRQTVGRRTEAEGASRRPERQQSSYQAVVILDAWTSLYALGVDARIDSLTDWMR
AASLCLPRTMGGQVMLIGETDPACAQSLMLWDSGILARQELHDRVETALPPVVAAASVWG
NRDAVMNAVNEVGAMRGERAAVQIHGEYVPALLGPVPIAPPRTLADRQLEGTHDRVRAIV
RVAVADRDDLALRLRASVAKHMATRNPKELHFKMDPKDLM
NT seq 2283 nt   +upstreamnt  +downstreamnt
atggctgattcggacgcagagcagctggcccttgacggccttgcccctcgaagacgtcgc
agacgaacgcctgcccagcgcatcgcggccgagcgcaatccaatcgcgcaggtgattctc
gatgttcaggcgacccagcttggcgataccttcgactatctggtgcaggccaaggatgat
gatgcggcactgcctggggtgcgtgtgcgcgtgcgctttggccgccaactgctcttcggt
ttcatatggaatcgcgttcagaccagtgccgttccaccgtcaacgcttcgattcatagag
cgggtcgtcagtccgagcatcgcagtgagcgagcaaggcagaatggacatcaccgacatc
gcacgtgcatacggtggaaccagggcgaacatactgcgcatggccgtgcctccgagagtt
gcccgcgtagatgccgagcaacggctcgtcaccggccgctttgcgattggcatgagcgag
ccgatgaaacgagacatgcgcgcatggtgtgacaggcgtttcgaaagcctgcgcgcgagc
tacgaccatgtcgaagaggtgcgaaggtcgcttgccgcgcatgcgggctccagctttgtg
tggaatgtcctgccaggagttctgcgctgggcgcgcgatgcctcatggacgctgatggag
gcactgcttcttggcaaatccgccgtcatggtgctgccggatatgcggcatgtccaggat
ctgagcgaggtccttcaggaagcgggactcagacccttcgctcccgcgaagggttcgcag
ggtgcatgggacggtgacttcgccgttctcggagcggccttgccaccggaggagcgctat
cgagcatttcaggcggtggcgagcgggcaggttcgctgcgtgatcggaacacgcgccgtc
atgtatgcgcctgttgaaggcagtggggtctttgccatcatggacgataacgcgtatcag
aatgccgatgggttcatgccctatgcccatgctcgcggagtattgaggcttcgtgccagg
aaccaccgtgggaccttcatcgatttctccgccgttcgcagtcccatgagtcagtgggag
attctcgacggcagccatgaaggcaatgcggtgtgcggcacgagcgtgaacgtccaaggt
ctgcgcacagccactcaggagcagtcgccttggattcgctggcttaaccatgaggagctc
tccagactcgccgatctggcaataggcgctcgcgtgccacacactgcggtatccgtgatt
cagcgcgcgttgaagctgggacccgtcctgctttcgattcctcgggagcatgccgttgac
gtgctgtgctgcaccaagtgtcacagacaggcacgatgcaatcgctgcaccggtcctctc
catgcagacacgcacgccgggagagtggcccactgcctgtggtgcggcgccgcagcggtg
gactggaagtgcaccaactgcggcaatgaaggcatgcgcgttctgcgagtaggcgcgcag
ggaacggcagcggagctacgaggtctgttccgtaatgttcccatcgtcctatcgacgcca
ctccagcccagggggatagtcacggatatcgctgacaggcctcagatcgtcattgcgacg
cctggtgcggaaccgaggatacggcagacggtagggcgccggactgaagcggagggggcg
tcgagacggcctgagaggcagcagtcttcatatcaggcggtagtcattctggatgcctgg
acgagcctgtatgcgcttggcgtcgatgctcgaatagactcgctgaccgactggatgcgt
gcggcctctctatgcctcccgcgaacgatgggcggtcaggtgatgctcatcggagaaacg
gatcctgcctgtgcccagtcgctcatgctatgggatagtggaatccttgcaagacaggag
cttcatgatcgtgtcgagaccgcgctgccgccagtggtcgctgccgccagcgtctgggga
aatcgggatgccgtcatgaatgcggtcaatgaggtcggcgccatgcgaggagagcgtgcg
gctgtgcagatacatggggaatatgtccctgcgctgcttggcccggtgccgatcgcaccg
ccaagaaccttggcggatcgtcagctggagggtacgcatgaccgcgttcgggcgatagtg
agggttgctgtcgcagacagggacgatcttgcattacggttgcgtgcaagcgtcgcgaag
catatggcgacgcgcaatccgaaggagctgcacttcaagatggatccgaaggacctgatg
tag

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