Bifidobacterium fermentum: QN062_03330
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Entry
QN062_03330 CDS
T10739
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bfk Bifidobacterium fermentum
Pathway
bfk00300
Lysine biosynthesis
bfk00470
D-Amino acid metabolism
bfk01100
Metabolic pathways
bfk01110
Biosynthesis of secondary metabolites
bfk01120
Microbial metabolism in diverse environments
bfk01230
Biosynthesis of amino acids
Module
bfk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bfk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QN062_03330 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QN062_03330 (dapF)
Enzymes [BR:
bfk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QN062_03330 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Secretin_N
Motif
Other DBs
NCBI-ProteinID:
XDS51219
UniProt:
A0AB39UGH1
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Position
complement(828003..828956)
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AA seq
317 aa
AA seq
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MSVPDIVYKGHGTGNDFVIYADPDGRYEPTAKEVRRVTDRHFGIGGDGLIRLAHPQDVTD
LSPEMVRTMQRNGVKWFMDYRNADGSLAQMCGNGTRVSALFAQMVSLESTAVASQDFILG
TRAGVKSIREVADDPILGKSLFQVDMGPWKVGVHDRYAVTLPGTEGLGRGTFADLGNPHI
VVVTQNRTSSPALLEQAKLSSLGDVADLDLTKTPMVEPILEDGQNVEFLDVVMIDEASDH
GMANMRVNERGVGETLSCGTGLCASAAVLRSLTGINHWTLGVPGGKLRVDVETDRVLLTG
AARIVARIELGDGALQI
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcccgacatagtctacaaaggccacggcacaggcaatgatttcgttatctat
gccgatccggatggtaggtatgagcccacagcgaaggaagtccggcgtgtcactgaccgt
catttcggcatcgggggagatgggctgatcaggcttgcgcacccccaagacgttaccgat
ctgagtcccgagatggttcgcaccatgcaacgcaacggggtgaaatggtttatggactat
cgaaacgctgacggttcccttgcacagatgtgtggcaacggcacgcgcgtttcggctttg
ttcgcgcagatggtctccttggaatcgacggcggtcgcatcgcaggacttcattcttgga
actcgcgcgggagtgaagtcgatacgtgaggttgcggacgatccgattctcggaaagagt
ctgttccaggttgacatgggaccttggaaggtcggcgtgcatgaccggtacgccgtcacg
ttgcctggcaccgaggggcttggaagaggtacgttcgccgacctgggcaatccacacatc
gttgtggtgacgcagaatcgcacatcaagccccgcactgctcgaacaggcgaagctttcg
tcacttggcgatgtcgccgacttggatttgaccaagacccccatggtggaaccgattctg
gaagatggacagaatgtcgagttccttgatgtggttatgatcgatgaggcctcggaccat
ggcatggcaaacatgcgtgtgaacgagcgcggtgtcggcgaaacgctgtcttgcggcaca
ggcttgtgtgcgagcgctgcggtgctgcgcagcctcaccggtatcaatcattggacgctt
ggagtgccgggaggcaagcttcgggtcgatgtcgagacggacagggtcctgcttaccggg
gcggctcgaatcgtagctagaatcgagcttggtgacggagctttgcagatttga
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