Bifidobacterium fermentum: QN062_03600
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Entry
QN062_03600 CDS
T10739
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bfk Bifidobacterium fermentum
Pathway
bfk03020
RNA polymerase
Brite
Enzymes [BR:
bfk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QN062_03600
Transcription machinery [BR:
bfk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QN062_03600
DNA repair and recombination proteins [BR:
bfk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QN062_03600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XDS51272
UniProt:
A0AB39UDD2
LinkDB
All DBs
Position
complement(906102..910196)
Genome browser
AA seq
1364 aa
AA seq
DB search
MLDVNAFDKLRIGLATAEDIRGWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPTRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSRVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLDI
APKDLEKVIYFAAYMVTKVDEDQRHQDLPDLQDEFDTEITRLEKARDNEIEKRAKKLEED
LAELESSAEAKGSMKSKVRNGAERDMAGIRQRYDDQIQRLSAVFDRFKGLQPGDMEGDVD
LWREMEDRYGDYFEGCMGAEAIKKRLQDFDLEACEKELRDEIETGSGQRKARALKRLKVV
NAFLTTGNKPEAMVLDVVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIE
LGAPEIMLNNEKRMLQEAVDSLFDNGRRGRPVTGASNRPLKSLSDMLKGKQGRFRQNLLG
KRVDYSGRSVIVVGPSLRMHQCGLPKPMALELFKPFVIKRLVDLNYAQNMKSAKRLVDRG
DAEVWGVLEEVISEHPVLLNRAPTLHRLGIQAFEPILVEGKAIHLPPLACAAFNADFDGD
QMAVHLPLSAEAQAEARSLMLASDNILKPADGHTVTMPSQDMILGLYYLSTVREGAKGQG
HILSSLAEARMALDRGEIDMQSKILLRVPSDFVLPKNWEPQDIKVVDPEPGEPDVAKEER
FKDGSFLFATSYGRMLVNETLPIDYPYINEQVPKGKLAGIVDDIATRYSTAQVAATLDAL
KDLGFTRAPWSGVTMAFSDIVAPPERNEMVQGYEKQADKVNSQYDMGLLTDEERRQELIN
LWTECTDKVAAAMREHFTADNNVNIMVQSGARGNWMQIRQIAGMRGLVANPKGEIIPRPV
KSNYRDGLSVLEYFISQHGARKGLADTALRTAESGYLTRRLVDVSQDVIVREQDCGTVRG
LTMKVAERDENGKLVLVKNADGGPYSRLLAADVVDPKDGKTVLYKRDQAMSMDVLRDMVA
HGIEEVKARSVLTCESKRGVCSKCYGWSLATNTLVDVGEAVGIVAAQSIGEPGTQLTLRS
FHSGGVASASDITQGLPRVTELFEARTPKGEAPIVEFPGNIKVEDTDRGRQVTLTPDDSS
IEAISYPVTRRAPLLVKDGDHVDVGTQLIEGSVDPKKILRILGPRAAQVNIVNEVHDVYR
SQGVDIHDKHIEVIVHQMLRRVTVIDSGDTDLLPGELADQAKFKTANIAAVKKGGKPAAG
RPELMGITKASLATDSWLSAASFQETTRVLTEASLSQKVDDLKGLKENVIIGKLIPAGTG
LARYHNAVVEPDKAIRDTIYPNFGLGGDGGNMDLSDADLNDVDFSNIDFGDLKLGDDFNP
DDFLNDQGGQTGVNSQDGDSDTANPDDGKTAGTAPSASSSSDQA
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaacgcatttgacaaactgagaatcggcttggccaccgcggaggatatt
cgtggttggagctatggagaagtgaagaagcctgaaaccatcaactatagaaccctgaag
cccgagaaggacggtctgttcggcgaacagatcttcggccccactcgtgactgggaatgc
gcatgcggcaaatacaagcgcgtgcgtttcaagggaatcgtgtgcgaacgctgcggcgtc
gaggtcaccaagtctcgcgtgcgtcgtgaacgcatgggacatatcgaacttgccgctccg
gtcacgcatatctggttcttcaagggtgtgccttcgaggcttggatatctgcttgacatc
gcccccaaggacctcgagaaggtcatctatttcgcggcctacatggtcacgaaggtggac
gaggatcagcgtcatcaggatttgcctgatcttcaggatgaattcgacaccgagataacg
cgtcttgaaaaggctcgcgacaacgagattgagaagcgtgcgaagaagctcgaagaggat
ttggcggaactcgaatcctcggcagaggcgaagggctccatgaagtccaaggttcgcaat
ggcgccgagcgcgacatggcgggcatccgtcagcgctatgacgatcagatccagcgtctg
agcgccgtgttcgaccgtttcaagggtcttcagcctggcgacatggaaggcgatgtcgac
ctctggcgggagatggaggatcgctacggtgattacttcgaaggatgcatgggcgccgag
gcgataaagaagcgtctgcaggactttgacctcgaagcctgcgagaaggaactgcgcgac
gagatcgaaaccggttccggccagcgcaaggcgcgagcactgaagcgtctgaaggtcgtg
aacgcgttcctgaccaccggcaacaagccagaggccatggttctggacgtagtcccagtc
attccccccgatcttcgccccatggttcagctcgacggtggccgttttgccacgtcggat
ctgaatgatctgtatcgtcgcgtgatcaaccgcaacaaccgcctgaagcgactcatcgag
ctcggcgcgccagagatcatgctgaacaatgaaaagcgcatgctacaggaggctgtggat
tcgctcttcgacaacggtcgccgtggccgtccggtcaccggtgcctcgaaccgtccgctc
aagtccctgtccgacatgctcaagggcaagcagggtcgtttccgtcagaaccttctcgga
aagcgcgtggattattccggtcgttccgtgatcgtcgtcggaccaagcctgcgcatgcac
cagtgcggtctgccgaagccgatggccttggaactcttcaagcccttcgtcatcaagcgt
ttggttgacttgaactatgcgcagaacatgaagtctgcgaagcgtcttgtcgaccgcggc
gatgccgaggtctggggcgttctcgaagaggtcatctccgagcatccagtgctgctgaac
cgtgcacctacgctgcatcgtctgggaattcaggccttcgagccaatcctggtcgagggc
aaggcaatccatcttccaccgctggcctgcgccgcgttcaacgcagacttcgacggcgat
cagatggctgtccaccttccattgagcgcggaggcacaggcggaggcacgttcgctgatg
ctcgcttcggataatatcctgaagccagccgacggacataccgtgaccatgccttcccag
gacatgatcctgggtctgtactatctgtcaaccgtgcgtgagggtgccaagggtcaggga
cacattctttcttcgcttgccgaggctcgcatggccttggaccgtggcgagatcgacatg
cagtcgaagattctgctccgcgtgccttctgactttgtgcttccgaagaactgggagcca
caggacatcaaggtggtcgatccagagccaggcgagccggatgtggccaaggaggagcgc
ttcaaggacggttcgttcctgttcgcgacctcatatggccgcatgctcgtcaacgagact
ctgccaatcgattatccatacatcaacgagcaggttcccaagggcaagcttgcgggcatc
gtcgatgacattgcaacccgctattcaacggctcaggttgcggccacactggatgccttg
aaggatcttggattcacccgtgcgccttggtccggcgtgacgatggcgttctccgacatc
gttgccccgccagagcgcaacgagatggttcagggatatgagaagcaggcagacaaggtc
aactcccaatacgacatgggtctgctgaccgatgaggagcgtcgtcaggagctcatcaac
ctgtggaccgaatgcaccgacaaggtcgcggctgccatgcgcgagcacttcaccgcagac
aacaacgtgaacatcatggtgcagtccggagcccgtggaaactggatgcagattcgtcag
atcgccggtatgcgtggtctggtggcaaacccgaagggcgagatcattcctcgtcctgtc
aagtcgaactaccgcgatggtctgtccgtcctggagtacttcatctcacagcacggtgcc
cgcaagggtctggcggatacggcactgcgaaccgcagaatccggctacctcacccgtcgt
ctggtcgatgtctcgcaggacgtcatcgttcgtgaacaggattgcggcacggtccgtggc
ctgaccatgaaggttgcggaacgcgatgagaacggcaagctcgtgctcgtcaagaatgcc
gatggcggaccgtattcacgtctgctcgccgccgacgtcgtggatcccaaggatggcaag
accgtgctgtacaagcgcgatcaggccatgtccatggatgttctgcgcgatatggtcgcg
catggcatcgaagaggtcaaggcccgttcggtgctcacctgcgaatcgaagcgcggtgtg
tgctcgaagtgctacggctggtcattggccaccaataccctggtcgacgtcggcgaggct
gtcggcatcgtcgcggcgcagtccatcggtgagcctggaactcagctgacgctgcgttcc
ttccactccggcggtgtcgcttcggcatccgacatcacccagggtcttcctcgtgtgacc
gagctttttgaggcccgcacgccaaagggcgaggctccgatcgtcgagttcccgggcaac
atcaaggtcgaagacaccgatcgtggtcgtcaggtcacactgaccccagacgattcgagc
atcgaagccatctcgtacccagtgacgcgaagggctccgctgttggtcaaggatggcgat
cacgtcgatgtcggcacacagctcatcgaaggatccgtcgatccgaagaagattctccga
atcctcggtccacgcgcagcgcaggtcaacatcgtgaacgaggtgcacgacgtgtatcgc
tcacagggtgtggatatccatgacaagcatattgaggtcatcgtgcatcagatgcttcgc
cgcgtgacggtcatcgactccggtgacacggatctgctgccgggcgaacttgccgaccag
gccaagttcaagactgctaacatcgccgcagtaaagaagggtggcaagcccgccgctgga
cgacccgagctcatgggcatcacgaaggcctctctggcgaccgattcctggctgtctgcg
gcttcgttccaggagacgactcgtgtgcttaccgaggcttcgctgagccagaaggtcgac
gatctcaagggactcaaggagaacgtcatcatcggcaagctcatcccagccggcactggt
ctggcgcgttaccacaacgcggtcgtcgaaccggacaaggccattcgcgacaccatctat
ccgaacttcggtctcggtggcgacggcggcaacatggacctgagcgatgccgatctgaat
gatgtcgatttctcgaacatcgacttcggcgatctcaagctcggtgatgacttcaacccc
gatgacttcctcaacgatcagggaggtcagaccggcgtgaactcgcaggacggtgacagc
gacacagccaatccggatgacggcaagacggcaggcacggctccgtcagcctcatcctcg
agcgatcaggcctga
DBGET
integrated database retrieval system
