Bifidobacterium fermentum: QN062_04345
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Entry
QN062_04345 CDS
T10739
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bfk Bifidobacterium fermentum
Pathway
bfk00300
Lysine biosynthesis
bfk00470
D-Amino acid metabolism
bfk01100
Metabolic pathways
bfk01110
Biosynthesis of secondary metabolites
bfk01120
Microbial metabolism in diverse environments
bfk01230
Biosynthesis of amino acids
Module
bfk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bfk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QN062_04345
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QN062_04345
Enzymes [BR:
bfk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
QN062_04345
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
XDS51405
UniProt:
A0AB39UH70
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All DBs
Position
complement(1070743..1072281)
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AA seq
512 aa
AA seq
DB search
MNAAPGITPIWPSGTNVCKGQMRFGGIGVAELVERFGTPVYLMDLDTMVGRAQWFRDVAV
TAFPNVTTHVSYSTKAFISKEVVRLLLRQGLFIDTCSMGEMRIALAAGAPGRRMVLHGNN
KSDDEIALAIEQGFAKIVVDEPDEPARIAAIAHRLGKVARVMLRVTVGIHAGGHEYISTA
HEDQKFGVPLLKGGSDPTMLEIDFSAGAGGPSRSTGSRSADGSTASRRLSSLYAHTPQEA
RENSDDELARAMDAIADGPALGVLKDIHSRSEDLELVGIHAHIGSQIHDAAAYAESAKRL
MLLRRTFWATDGFMLPEVDLGGGFSIAYTDSDTSMDIESTMAVLSDAISATTQRLGLPAP
VLSFEPGRWIAGPSGVTLYRVGTVKPVRLSDGTVRTYVSVDGGMSDNIRPALYGADYAVR
LANRCGSDSTMLVRVVGKHCESGDVVVHDAQLPEDVQRGDILAVPVTGAYCRTMASNYNQ
LPTPAVIGISEGKAHVLIKAMTIEDLLALDQD
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagcaccaggcatcacaccaatttggccatcaggcaccaacgtgtgcaagggg
cagatgcgctttggcggaatcggggtcgccgagctcgtcgagcgcttcgggactccggtg
tatctgatggacttggacaccatggtcggcagggcgcagtggttccgcgatgttgccgtc
accgccttccccaacgtgacgacgcatgtcagctattccacgaaggctttcatcagcaag
gaagtcgtacgtctgctgctgaggcagggactgttcatagatacctgcagcatgggtgag
atgcggatagccctagctgccggcgctcctggccgtcgaatggtgcttcatggcaacaac
aagtcggacgatgagatagcgctcgcgatcgagcagggtttcgcgaagatcgttgtcgac
gaaccggacgagcctgcacggatcgccgccattgcccaccgtctcggcaaggtggctcga
gtgatgctgcgagtcaccgtcggcatacatgccggcgggcatgaatatatctcaacggcg
catgaggatcagaaatttggcgttccgctgctgaaaggcggcagcgatccgacgatgttg
gagattgacttctccgctggggcaggcgggccatctcggtcgacaggcagccgttctgct
gatgggagcaccgcatcgcggcggctttcgtcgctctatgcgcatacgccgcaagaggca
agggagaacagcgacgacgaacttgcaagggccatggatgcgattgccgatggacctgcg
cttggagtgctgaaggacattcacagtcggagcgaggatctggaactcgtcggcattcat
gcccatatcggttcacagatacatgatgcggcggcatacgccgagtctgcgaagcgtctg
atgctgctgagacgcaccttctgggcgaccgatgggttcatgctgcctgaggtcgatctg
ggtggtggattctcgatcgcgtataccgattccgatacttcgatggacattgagtccacg
atggcagtgctgtccgatgccatctcggccacgacgcagcgccttggattgccggccccc
gtgctttccttcgaaccggggcgttggatcgcgggaccttcaggcgtcacgctctatcgg
gtgggcaccgtcaagcctgttcggctttcggacggtacggtcaggacctatgtgtcggtc
gatggcggcatgagcgacaacatacgacccgcgctctatggtgccgattacgcggttcgc
ttggcgaaccggtgcggaagcgacagcacgatgctcgtccgtgtggttggcaagcattgc
gaatcgggtgatgtggtcgtgcatgatgcccagctgccggaagacgttcagcgtggcgac
attttggccgtgcccgtcacgggagcctattgccgtaccatggcaagcaactacaatcag
cttcccacgcctgcggtcattggcatcagcgaaggaaaggcacatgtgcttatcaaggcg
atgaccatcgaggatcttctcgcgctggatcaggattga
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