Bifidobacterium fermentum: QN062_05110
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Entry
QN062_05110 CDS
T10739
Name
(GenBank) D-alanine--D-alanine ligase family protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bfk Bifidobacterium fermentum
Pathway
bfk00470
D-Amino acid metabolism
bfk00550
Peptidoglycan biosynthesis
bfk01100
Metabolic pathways
bfk01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bfk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QN062_05110
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QN062_05110
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
QN062_05110
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bfk01011
]
QN062_05110
Enzymes [BR:
bfk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
QN062_05110
Peptidoglycan biosynthesis and degradation proteins [BR:
bfk01011
]
Precursor biosynthesis
Amino acid ligase
QN062_05110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
GARS_A
DHU1_N
Motif
Other DBs
NCBI-ProteinID:
XDS49801
UniProt:
A0AB39UD24
LinkDB
All DBs
Position
complement(1248501..1249730)
Genome browser
AA seq
409 aa
AA seq
DB search
MAKKRIVVLYGGVADEHPISCISAASVLRAIDTDRYDVIPVGITRKGQWIVDGEDPKGWK
LGDSNLPSVEITKRSRPVLLDPALGSDGFFAGEHDDLKNPANGYGTNFVSMSDIDPGKHN
MVCTLGHVDAVFPVLHGPYGEDGTVQGLFEMMNVPYVGCGVLASSVCMDKHFTKILLRAA
GIDVAPWVTFDARTFDADSQFGNSADSMLAQVREAGLHYPLFVKPSRAGSSFGVTKVEGS
DASDEDAAKRLAAAVFEASHHDWKVLVEEGIDGREIECAVLRDVPSEATRTSLPGEVVLD
SRSKGDDDAFYDFDSKYMDESASHVEVPANLPQDVLQRVRSVAGKAFDAVDGMGLSRVDT
FVRPDGSVMVNEINTMPGFTSISMYPKAWEATGVEYSKLITMLIEGILR
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaacgcattgttgtgctgtacggaggcgtggctgacgagcatcctatttct
tgcatttcggcggcaagcgtcctgcgcgcaatcgatacggatcgctacgatgtgattcct
gtcgggattaccaggaaaggtcagtggattgtcgacggagaggatcccaagggctggaag
ctaggggattcgaatcttccaagcgtcgagatcacgaagaggtcaaggccggtgctgctc
gatcctgcacttggttcggatggtttcttcgccggcgagcatgacgatctgaagaatccc
gccaacggctacggcaccaacttcgtgagcatgagcgacatcgatcccggcaagcacaat
atggtatgcacgctcggccatgtcgatgcggtgttcccggtgttgcacggaccctatggc
gaggatgggacggttcagggcctctttgagatgatgaacgtgccttatgtcggctgcggc
gtgctcgcatcctcggtgtgcatggacaagcatttcaccaagatcctgctccgcgccgcg
ggaatagacgtcgcgccctgggttaccttcgacgcccgtacattcgatgcagattcacag
ttcgggaacagtgccgattccatgcttgcccaggtccgggaggcaggattgcattaccct
ctgttcgtcaagccttcaagggctgggtcgagctttggagtgaccaaggtcgaaggctcc
gacgcttcggacgaggatgcggcgaagcggcttgcggcagctgtcttcgaagcctcgcac
cacgactggaaggtacttgtcgaagaaggcatcgacggccgtgagatcgaatgcgccgtc
ttgcgcgacgtcccttccgaagcgacgcgcacaagtctgccgggcgaggtcgtgcttgac
tcgcgcagcaaaggcgatgacgatgccttctatgatttcgacagcaagtacatggatgaa
tcggcatcgcatgtcgaagttcccgcgaatcttccacaggatgtgcttcagcgggtgcgt
tccgtcgccggaaaggccttcgacgcggttgacggcatgggtctgagcagggtcgacacc
ttcgtcaggccagacggctccgtgatggtcaacgaaatcaacacaatgcctggcttcacc
tcgatttcgatgtatccaaaggcttgggaggccacaggagtcgaatactcgaagctgatc
accatgctgatcgagggaattctccgctag
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