Bifidobacterium fermentum: QN062_07675
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Entry
QN062_07675 CDS
T10739
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bfk Bifidobacterium fermentum
Pathway
bfk03030
DNA replication
bfk03430
Mismatch repair
bfk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QN062_07675 (dnaX)
03430 Mismatch repair
QN062_07675 (dnaX)
03440 Homologous recombination
QN062_07675 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfk03032
]
QN062_07675 (dnaX)
03400 DNA repair and recombination proteins [BR:
bfk03400
]
QN062_07675 (dnaX)
Enzymes [BR:
bfk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QN062_07675 (dnaX)
DNA replication proteins [BR:
bfk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QN062_07675 (dnaX)
DNA repair and recombination proteins [BR:
bfk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QN062_07675 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
RuvB_N
AAA_30
AAA_22
zf-CXXC
DEAD
AAA_14
AAA_19
AAA_2
Rad17
AAA_18
Motif
Other DBs
NCBI-ProteinID:
XDS50267
UniProt:
A0AB39UAT1
LinkDB
All DBs
Position
1913008..1915743
Genome browser
AA seq
911 aa
AA seq
DB search
MGLALYRRYRPDTFASVIGQNQVTVPLSRALDSGKLTHAYLFSGPRGCGKTSCARILARC
INCEKGPTSHPCGTCESCRDLATGGPGSIDVVEIDAASHNGVDDARELRERAGFAPARDR
YKIFILDEAHMVTQQGFNALLKIVEEPPEHVIFIFATTEPDKVIGTIRSRTHHYPFRLVP
PEIMGPYLEQVCAKEHVKAGSGVLRLAMRAGGGSVRDTMSVLDQLMVGAEDGVITHEAAS
ALLGFTPDAMISESIDAIAQQNGEALYGVIEKVVIGGFDPKRFVEDLLSRIRDLLVVAVG
GSKARTVLESDDDNEDFSELQRQSESLGLRSLNDIADAINAALSNMGGAISPRMRLELLA
ARILAMRADELHPQSNAPSDQAAERPQHAGRANRSGADGEASRSGSGFIGSQRNAEVPKT
AKDAEDGQSMAIDEAPVNAAVSGESHQEVSSAASQELGSNAAPSAATGSGQTGDGGTRSD
AGNMSETAQTAQTAQTSAIGTDERWDALVSALPGDVREYVDRGRVPSVKLMDAPKGRKRL
LMTFDVPLSQHAFALAVSRESVHGQTSVPKIVMHAVQQAFDTETMIFPSGVAANGEQVGS
TRRMSPEQVANVKRQIALQKAGLSASNLGSAMKPVASSHNEATRQNHGGAASQGHADSPT
DGHHRKRPQGGNDGHGSQNAANPHGVRDSRVVESEQGWPMPHGNEHAGRTESSNRSDDLR
HSHNVKHVALPDLNNSDDPWAPTVAADSNPSQTAETNPSGQPDANDAGTNSATGAVSAAS
AASTPGPVSTAAAYSATGSGSVPASDDRSRGSVQAAKSRPTQLVRVDMSENGQDGPHAEP
QGNAHSEKRMDPSQDTYSMDDPALNTDQSLNMDDIRQLFNVKKIEEFAADDPKNPRNVQR
RNNQQHAQGNE
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgggacttgcattatatcgacggtatcgtccggatacatttgcttcggtcattgggcag
aatcaagtgaccgttcctctttcgagggccttggactctggcaagcttactcatgcctat
ctgttttcaggcccgcgaggctgtggcaagaccagctgcgcccgtattcttgcacgatgc
atcaactgcgagaaggggcccacaagccatccttgcggtacctgcgagagttgcagggat
ctggccaccggcggtcccggctcgattgatgtggtagagatcgacgctgccagtcacaac
ggcgttgacgatgcgcgtgagctgcgcgaacgcgcaggtttcgcgcctgcaagggatcga
tacaagatattcatactcgatgaggcccatatggtcacccagcagggtttcaatgcgttg
ctgaaaatcgtcgaggagcctcccgagcatgtcatcttcatctttgctacgacagagccg
gacaaggtgattggcaccatccgttcaaggacgcaccactatccattccgtctggttccg
cccgagataatgggaccttaccttgagcaggtctgcgccaaggagcatgtcaaggcaggt
tcgggggtcttgcggcttgccatgcgggcaggtggcggttcggtaagggacacgatgtcc
gtgctcgaccagctcatggtaggtgccgaggatggtgtcatcacgcatgaggctgcgagt
gcattgcttggtttcactcccgatgcgatgatttccgaatcgatagatgccattgcccag
cagaatggcgaggctctctatggtgtgatcgagaaggtcgtcattggaggattcgatccg
aagcgattcgtcgaggatctgctgtcacggattcgtgaccttcttgtggttgcggtggga
ggatccaaggcacggactgttttggaatccgacgacgataatgaggatttttcggagttg
cagcgtcagagtgagtcccttgggttgcgttcgctgaatgatatcgccgacgccatcaat
gcggcgctgtccaacatgggcggcgccatctctcctcgaatgcgcttggaactgctggct
gcgagaatccttgccatgcgggccgatgagcttcatccgcagtcgaatgctccatcggat
caggcggctgagaggccgcagcatgctggccgggcaaaccgctctggagccgatggagaa
gccagccgcagtggttcgggattcatcggttcgcagcgcaacgcggaagtgccgaagacg
gcaaaagatgccgaagacggccagtccatggccatcgacgaggctccggtcaatgctgcg
gtcagcggtgaatcgcatcaggaggtgtcctctgcggcttcgcaggagcttggatcgaat
gccgcccccagtgccgcgaccggcagcgggcagacaggtgatggcggcactcgcagcgat
gcgggcaacatgtctgaaactgctcaaactgctcaaactgctcaaacgagtgccatcggc
accgacgaacgatgggatgcattggtcagcgctctgccaggcgatgtcagggaatatgtc
gataggggcagagtgccctccgtgaaactgatggacgcgccgaagggcagaaagcgtctg
ctgatgaccttcgatgtgccactgagccagcatgccttcgcactcgcggtctcacgtgaa
tcggttcatggccagacaagcgtgccgaagatagtgatgcatgccgttcagcaggcattc
gatacggagaccatgattttcccctccggtgtggcagcaaatggtgagcaggtcggttcg
acccgaagaatgtctcccgaacaggtcgcgaacgtcaagcgtcagatagccttgcagaag
gcgggtctttcggcatcgaaccttggttccgcgatgaagcccgtggcgagttcgcacaac
gaggcaaccaggcagaaccatggaggggcggcctcgcaggggcatgccgattcgccgacg
gatggccatcatcgaaagcgtccgcaaggcggtaatgacggtcatggcagtcagaatgcc
gcgaatccccatggtgttcgggattcgcgggttgtcgagagcgagcagggctggccaatg
cctcatggcaatgagcatgccggacgaaccgagagttccaatcgttcggatgacttgcgg
cactcgcataacgtcaagcatgtcgcgttgccggacctgaacaattcggatgacccgtgg
gctcccacggtcgcagcggattcgaatccttcacagacagctgagacgaatccgagtgga
cagcctgacgccaatgacgccggcacgaactcagcaaccggtgcagtctcagcagccagc
gcagcctccacgccaggtccagtctccaccgcagctgcatactccgcgacaggttcagga
tccgtgccagcttcggacgacagatcgaggggctcggtgcaggctgcgaagtccaggcca
acccagctcgtgcgcgtagacatgtctgagaacggccaggacggcccgcatgcggagccg
caggggaacgctcattcggaaaagcgaatggatccctcgcaagacacctattccatggac
gatcctgcgctcaacacggatcaatccctgaatatggacgatatcaggcaattgttcaac
gtaaagaagatagaggaattcgcagcggacgatccgaagaatccaaggaatgtccagcgc
cgcaacaaccaacagcatgcacaggggaatgagtaa
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