Bifidobacterium fermentum: QN062_07925
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Entry
QN062_07925 CDS
T10739
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bfk Bifidobacterium fermentum
Pathway
bfk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bfk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
QN062_07925 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfk03019
]
QN062_07925 (rnc)
03009 Ribosome biogenesis [BR:
bfk03009
]
QN062_07925 (rnc)
03036 Chromosome and associated proteins [BR:
bfk03036
]
QN062_07925 (rnc)
Enzymes [BR:
bfk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
QN062_07925 (rnc)
Messenger RNA biogenesis [BR:
bfk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QN062_07925 (rnc)
Ribosome biogenesis [BR:
bfk03009
]
Eukaryotic type
90S particles
RNase
QN062_07925 (rnc)
Prokaryotic type
rRNA processing factors
QN062_07925 (rnc)
Chromosome and associated proteins [BR:
bfk03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
QN062_07925 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
XDS50313
UniProt:
A0AB39UIU1
LinkDB
All DBs
Position
complement(1980192..1981007)
Genome browser
AA seq
271 aa
AA seq
DB search
MSQQEHKEISNQSASETASASTGNPSFVASQPKAPSGPDELLEALGSPVSPDLLVHALTH
RSFANEHHGLPNNERLEFLGDAVLELVSTETLFRIHPDMNEGQLAKMRAKAVSEEALSAI
ARTKLKLGPYILLGHGESASGGADKDSILCDTVEALIGAVFVEHGIEGGRKVVHRLVDDT
LAEVATEGPALDWKTSLTVKANHMNLGEPHYRMKVSGPEYQQTFTAEVMLGDSPKILASA
EGSSKRKAQLAAAEVAWKLLDAEKSQQQPQS
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagcaggaacacaaggaaatctcgaaccaatcagcatccgaaacggcctctgca
tcgaccggaaacccgtctttcgtggcttcccagccgaaagcccccagtggcccggatgag
ctgctggaagctttgggaagtccggtgagtccggatcttctcgtccatgcgctcacccat
cgttcctttgccaatgagcaccatggactgccaaacaatgagcgtttggaattccttggc
gacgcggtgcttgagctcgtatccacggagacactgttcaggattcaccctgacatgaac
gaagggcagctcgcgaagatgcgggcaaaggccgtatcggaagaggcgctttccgcaatc
gctcgaaccaagttgaagctgggcccatacatccttcttggccacggcgagtccgcaagc
ggcggcgccgacaaggattccattctctgcgacaccgtcgaggcgctgatcggtgcggtt
tttgtcgagcatggcatcgaaggtggccgcaaggtggtgcatcgtctcgttgacgatacc
ctggcggaagtcgcgaccgaaggtccggctctggactggaaaacctcgctgacagtgaag
gcaaaccatatgaatcttggcgagcctcactaccgcatgaaggtttcaggccctgaatat
cagcagaccttcactgcagaggtcatgcttggcgattcgcccaagattcttgccagtgcc
gagggcagcagcaagcgcaaggcccagttggctgcggcagaggttgcgtggaagcttttg
gacgcagaaaagagccagcaacagccgcaatcatga
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