Bifidobacterium fermentum: QN062_08385
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Entry
QN062_08385 CDS
T10739
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bfk Bifidobacterium fermentum
Brite
KEGG Orthology (KO) [BR:
bfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfk03016
]
QN062_08385 (truB)
Enzymes [BR:
bfk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QN062_08385 (truB)
Transfer RNA biogenesis [BR:
bfk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QN062_08385 (truB)
Prokaryotic type
QN062_08385 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
XDS50395
UniProt:
A0AB39UB08
LinkDB
All DBs
Position
2067351..2068646
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AA seq
431 aa
AA seq
DB search
MAESGILLVDKPQGVTSHDVVAAVRGALHTRHVGHAGTLDPMATGLLVIGFGDATRLLRY
MVGHDKQYVATIRLGLATDSDDADGRILRPDATVRKRVADIVKTISLDGLQALVDEFFVG
AIEQIPSAFSSVRVNGKHAYELARNGEKPNLAPREVTVHKFDILGLRNDDVRIHDADCRL
AVDSADYVGEAADVAGGNDVDDHHDHDHGHADDESSVRVSVLDVFVRVSCSSGTYIRALA
RDLGARLGIGGHLVALRRTRVGGFLVGREESPYESSVQPANPQIADDAPLCTVAGTEVRT
HVARVRVVPRELTDRKTGKLIVRNRAVMLEDAESLLKSALSPAVAASTMMNSIDISAKEA
EDLSHGRIIARHVSDPTAAIHEPRHSSASGESATATSSPRLCAILVPYRHDSAKPQTVFS
DAFEEWQKKQK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtcggggatccttcttgttgataagccgcagggcgtaaccagccatgatgtg
gtggctgcggtaaggggtgccttgcatacgcgacatgtcggtcacgctgggactctggat
cccatggcgaccggactcctggtcataggcttcggcgatgccacaagattgctgcggtac
atggtcgggcatgacaagcagtatgtggcaaccatacggctaggtctggcgactgattcc
gatgatgccgacggccggatacttcgaccggatgccactgtcaggaaacgggttgcggac
atcgtgaagacgatcagccttgatggtctccaggctcttgtggatgaattcttcgtcggc
gcgatcgaacagattccaagcgcgttctcttctgtgcgtgtcaatggcaagcatgcctat
gaactggctcgcaatggggaaaagccgaatctggctccacgtgaggttaccgtccataag
ttcgatattcttgggttgcgaaacgacgacgtacggattcatgatgcggattgtcgtctt
gcagtggacagcgccgactacgtgggtgaggctgcggatgtcgccggaggcaatgatgtt
gatgaccatcatgaccatgaccatggccatgctgatgatgagagctcagtgagagtctca
gtcctcgatgttttcgttcgtgtgagttgttcgagtggaacgtatattcgtgcattggcg
cgtgacctgggtgcccggctaggcattggcggccatcttgtcgctcttcggcggacgagg
gtcggaggttttcttgtcggtcgggaagaatcgccatacgagtcctcggtccagcctgcc
aatccgcagatagcggacgatgcacccttatgcacggtggcgggcacagaggtccgaaca
cacgttgccagggtcagggttgttccgcgcgagcttacagataggaaaaccggcaagctt
atcgtccgcaacagggcagtgatgctggaagatgccgagtctctcttgaaatcagccctc
agcccagcggtcgcagcctcgacgatgatgaattccatagatatttctgcgaaggaggcg
gaggatctgagtcatggcaggattatcgccagacacgtatcagacccaaccgctgcgata
catgagccaaggcacagttcggcgtccggcgaatcggcaacggcgacgtcaagtccgcga
ttgtgcgcgatcctggtcccctataggcatgattcggccaagcctcaaaccgtgttttcc
gatgcattcgaggaatggcagaagaaacagaagtga
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