Candidatus Blochmanniella floridana: Bfl056
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Entry
Bfl056 CDS
T00138
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
bfl
Candidatus Blochmanniella floridana
Brite
KEGG Orthology (KO) [BR:
bfl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Bfl056 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfl03021
]
Bfl056 (rpoD)
Transcription machinery [BR:
bfl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bfl056 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF2610
TMPIT
Motif
Other DBs
NCBI-ProteinID:
CAD83581
UniProt:
Q7VQR2
LinkDB
All DBs
Position
complement(59697..61550)
Genome browser
AA seq
617 aa
AA seq
DB search
MDHNPQSQLKLLVTRGKEQGYLTFSEVNDHLPEDIIDSDQLNNIIQMMNDMGIQVMEEAP
DSDDFLLTENCGTSNNDEEDATEAAVQALSHVDTDLGRTTDPVRMYMKEMGAVELLTREG
EIDIAKRIEDGIHQVQCSVAEYPEAITYLLEQYKRVKTGEVRLSDLVTGFVELNLEHDTL
STKTIHDGYITPEIINSPIIIDDEENTENDDDNNVDPELARKKFTDLQKQYEKTRITIKY
NGRDHHQSLLEILKLSEVFKQFRLVPKQFDYLVNNMRSMMDRIRLQERLIMKLCVDVSQM
PKKKFINLFSGNETSKDWLNKALSLNTSWSQKLHNVDSKIQQSLYQLHQIEKETGLTIEQ
IKNINKRMAIGEAKAKRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVD
KFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRVSRQILQETGCE
PTPEELAERMFMSEDKIRKVLKIAKEPVSMETPIGDDEDSHLGDFIEDTNLDLPLDSATS
DNLRAATNDVLSGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRK
LRHPSRSEILKSFLDDD
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggatcataacccacaatcacaacttaaattacttgtaacacgtggtaaagaacaaggt
tatctaaccttttctgaagtaaatgaccatttaccagaagatataatcgattctgatcaa
ctcaataatattattcaaatgatgaatgatatgggtattcaagtgatggaagaagctcct
gattccgacgactttttattaacagaaaattgcggtacttccaacaatgatgaagaagat
gctacagaagcagctgtacaagcactatctcatgtagatacagatcttggaagaacaact
gatccagtacgcatgtatatgaaagagatgggtgcagtggaattattaactagagaagga
gaaatagatatcgctaaaagaattgaagatggaattcatcaagttcaatgttcagttgca
gagtatccagaagcaattacttatttattagaacaatacaaacgtgtaaaaaccggtgaa
gtgcgtttatcagatttagtcactggatttgtagaactcaatttagaacacgatacctta
tctacaaaaacaattcatgatggttatatcacaccagaaattattaattctccaatcata
attgatgatgaagaaaatacagaaaatgatgatgataataatgtagatccagaattagca
cgaaaaaaatttacagatttgcaaaaacaatacgaaaaaacccgaatcacaattaaatat
aatggaagagatcatcatcaatcattattagaaattttaaaactttctgaagtatttaaa
caatttagattagttcctaaacaatttgattacttagttaataatatgcgttctatgatg
gatcgcattcgtttacaagaacgattaattatgaaactatgtgtagacgtcagccaaatg
cctaaaaaaaaatttattaatttattttctggtaatgaaactagtaaagattggctaaat
aaagctttatctttaaatacatcatggtcccaaaaactacacaatgttgactcaaaaata
caacaaagtttataccaacttcatcaaattgaaaaagaaacaggattaacaatagagcaa
ataaaaaatattaataaacgtatggctattggagaagctaaagctaaaagagctaaaaaa
gaaatggttgaagctaaccttcgtttagtcatatctatcgccaagaaatatacaaataga
ggattgcaatttttagatttaattcaagaaggtaatataggtcttatgaaagcagtagat
aaatttgaatatcgtcgtggttataaattttctacctatgccacttggtggattcgccaa
gctattacacgatctatagcagatcaagcacgcactattcgcattccagtacacatgatt
gaaacaatcaataagctaaaccgagtttcacgtcaaattttacaagaaacaggttgtgaa
ccgacaccagaagaattagcagaacgtatgtttatgtcagaagataaaattagaaaagta
ttaaaaattgctaaagaacctgtttctatggaaactcctataggagacgatgaagattca
catcttggagattttattgaagatacaaatcttgatttacctttagattctgcaacatca
gacaatttaagagctgctaccaatgacgtactttctggattaactccaagagaagcaaaa
gtattacgtatgagatttggaatagatatgaataccgatcacactttagaagaggtagga
aaacaatttgatgtgacccgagaacgtattagacaaatagaagctaaagcattaagaaaa
ctcagacaccctagtcgatcagaaatattaaaaagttttttagatgatgattga
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