Candidatus Blochmanniella floridana: Bfl108
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Entry
Bfl108 CDS
T00138
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase, member of mRNA degradosome
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bfl
Candidatus Blochmanniella floridana
Pathway
bfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bfl108 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfl03019
]
Bfl108 (pnp)
03016 Transfer RNA biogenesis [BR:
bfl03016
]
Bfl108 (pnp)
Enzymes [BR:
bfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Bfl108 (pnp)
Messenger RNA biogenesis [BR:
bfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bfl108 (pnp)
Transfer RNA biogenesis [BR:
bfl03016
]
Prokaryotic type
tRNA degradation factors
Bfl108 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_2
KH_2
S1_RRP5
UPF0181
Motif
Other DBs
NCBI-ProteinID:
CAD83629
UniProt:
Q7VQM0
LinkDB
All DBs
Position
117421..119514
Genome browser
AA seq
697 aa
AA seq
DB search
MLNSIVHKFQYGQHTVVLNTGAIARQANAAVMVSIGDTTVLVTVVSSNQEKIDQGFFPLV
VHYQERTYAAGKFPGGFFRREGRPSESEILTSRLIDRPIRPLFPKGFLNDIQIIATVVSV
NPQIHPDIVAMIGVSAALSLSDIPFFGPIGAARVGYIKDQYILNPTTIELSNSKLDLVVA
GTDSNILMVESAACVLSEQEMLNAIVFGHEQQQTVIQNINQLVKKAGKVKYDWKLKDMDI
LLSEYLSNLYRSRVNVSCLVGVNKKDRQEQLNNIKHDIIDITLREYNENIDVNEVMSFLN
NLEIKLLRSSILRDNVRFDGRSPDMIREIDISAGILPRTHGSALFTRGDTQALVTATLGT
ERDAQNLDELTGDRVDRFLLHYNFPPYCTGEIGIVGAPRRREIGHGRLAKRGMLAVMPNS
NEFPYTVRVVSEVTESNGSSSMASICGASLALMDAGVPIKESVAGVAMGLIKENSNFIIL
SDIISDEDHIGDMDFKVSGTRTGITALQMDIKIKGITYDIIEVSFKKARCALLRILDIMD
QVIKIPRKDISEFAPRIYSIKINPDKIKDVIGKGGSVIRALTEKTSTIIDIEDDGVIKVI
SLNAEKAKQAVDRIQEITANIAIGSIYTGRVTHIVDFGAFVTLFAGKEGLVHISQITEKR
VNRVSDYLKLGQEVLVKVLEIDRQGRMRLSMRGINHI
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaattcgattgttcataaatttcagtatggtcaacataccgtggttttaaatact
ggcgctattgctcgtcaagctaatgctgcagttatggttagcataggtgatactacagtt
ttagttactgtggtaagttctaatcaagaaaaaatagatcaaggtttctttccattagtt
gtacattatcaagaacgtacttatgctgctggaaaatttcctggaggtttctttagaaga
gagggtcgtcctagtgaaagtgaaattttgacttctcgtttaattgatcgtccaatacgt
ccgttatttcctaaggggtttttaaatgatattcagattattgctaccgtggtatcagta
aatcctcagatacatccagatattgttgctatgataggggtttctgcagctttaagttta
tctgatattcctttctttgggcctattggagctgcaagagtgggatatattaaggatcag
tacatattgaatccgaccactattgaattatctaatagtaaattagatttagttgttgct
ggaactgattccaatattttaatggtagagtcagcggcttgtgtgttaagcgaacaagaa
atgttaaatgctattgttttcggtcatgaacaacaacaaacggttattcaaaatattaat
caattagtaaaaaaagccggtaaagtgaaatatgactggaaactaaaagatatggatata
ttattaagtgaatatttatctaatttatatagatctcgagtgaatgtttcgtgtcttgtc
ggagtaaataaaaaggatcggcaggaacaattaaataatattaaacacgatattattgat
attactctaagagagtataatgagaatattgatgtcaatgaagtgatgtcttttttgaat
aatttagaaataaaattattacgtagtagtattttaagagataatgtccgttttgatggg
cgttcgccagatatgattagagagatagatattagtgctggaatacttcctagaactcat
ggttcagcattatttacgagaggagatactcaagctttagttactgctactcttggaact
gagagggatgcacaaaatttagatgaacttacaggagatagggttgataggtttttatta
cattataattttcctccgtattgtacaggagagattggtatagtgggagctccaagacga
cgggagattggtcatggtagattagcaaagcgtggtatgttggcggttatgcctaattct
aatgaatttccttatacagtacgtgtggtgtcagaagttactgaatcgaatggttcttct
tctatggcttctatttgtggggcatcgttggctttgatggatgctggtgttccaattaag
gaatctgtagcaggagtggctatgggattaattaaagaaaatagtaattttattatattg
tctgatattattagcgatgaagatcatattggagatatggattttaaagtttctggtact
agaacgggtattactgcattgcaaatggatattaaaattaagggaattacttatgatatt
attgaagtttcttttaaaaaggcaaggtgtgctctattacgaatattagatattatggat
caagttattaagattccgcgtaaagatatttctgaatttgctcctagaatatatagtata
aaaattaatccagataaaattaaagacgtgataggtaagggaggttcagtaattagagca
ttaacggagaaaacaagcactattattgatattgaagatgatggtgtaataaaagtaata
tctttgaatgctgaaaaagcaaaacaggctgttgaccgaattcaagagattactgctaat
attgcaataggttcaatttatactggaagggtcactcatattgtggattttggggctttt
gttactttatttgcaggaaaagaaggtttagtgcatatttctcaaattacagagaaaaga
gtgaatagagtttctgattacctaaaattaggacaagaggtattggtaaaagttttagaa
attgatcgtcaaggaagaatgcgtttaagtatgagaggaataaatcatatataa
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