Candidatus Blochmanniella floridana: Bfl109
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Entry
Bfl109 CDS
T00138
Symbol
deaD
Name
(GenBank) Cold-shock DEAD-box protein A, inducible ATP-independent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bfl
Candidatus Blochmanniella floridana
Pathway
bfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bfl109 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfl03019
]
Bfl109 (deaD)
03009 Ribosome biogenesis [BR:
bfl03009
]
Bfl109 (deaD)
Enzymes [BR:
bfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bfl109 (deaD)
Messenger RNA biogenesis [BR:
bfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bfl109 (deaD)
Ribosome biogenesis [BR:
bfl03009
]
Prokaryotic type
rRNA helicases
Bfl109 (deaD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CAD83630
UniProt:
Q7VQL9
LinkDB
All DBs
Position
119755..121218
Genome browser
AA seq
487 aa
AA seq
DB search
MLDSENSFVDLGLNTYIVDMLSNIGYQAPLPIQTQCIPLLLKGCDLLGMAHTGSGKTAAF
LLPLLQNIDIKQRFVQGLIIVPTRELAIQIGHVCMYFIKSLSHIINIAVLYGGQNYRIQF
NDLKKNPHIIIGTPGRLLDHLSRGLDISKLKTLIIDEADEMLRMGFIEDIEHIIRYVPTH
RQTALFSATLPVSIRKLSYKFMCNPKEIYINPSISACADIKQSYWLVHGISKHEALMRFL
EVEKFEAVIIFVRTKSATLQISEILQRFGYNSAALNGDMNQSVRCKTISRLRCGTLDILI
TTDVAARGLDINRISFVINYDIPCNYNAYVHRIGRTGRAGRSGKSLLFVERQEYHLFNYV
IKRRVLNSNIVKVKCPTSNDLVRCRLKKFTDKVVNNLESKDIEQYQSLLGKIKIDLDITI
EKLAAILLKIAQGSQSLIISSDDQRINKKIIYYNKSDLKKNSAHKNKSYFVHSRRSIKCS
NVYYKKK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttagactctgaaaattctttcgtagatttagggttaaatacatatattgtagatatg
ttaagtaatattggatatcaggctccgttgcctattcaaactcaatgtattcctttgctg
ttgaaaggatgtgatttattaggaatggctcatactggtagtggtaaaactgcggcgttt
ttattgcctttgttgcaaaatattgatattaaacaacgttttgttcaaggtttaattata
gttccgactcgagaattagctattcaaataggtcatgtatgtatgtattttattaagtct
ttgagtcatataattaatattgcagttttatatggtggacaaaattatagaattcaattt
aatgatttaaagaaaaatcctcatattatcataggaaccccaggtagattattagatcat
ttaagtcgaggattagatatatcaaaattaaaaactttgattatagatgaagctgatgaa
atgttacgtatgggatttattgaagatatagaacatattattcgttatgttccaactcat
aggcagacagcattattttctgctactttacctgtgagtattagaaaattaagttataag
tttatgtgtaatcctaaggaaatctatatcaatcctagtatttcagcatgtgctgatatt
aagcagagttattggttagtacatggtatatctaaacatgaagctttgatgcgttttttg
gaagtagaaaagtttgaagcagtaataatatttgtacgtactaaatctgcaaccttgcaa
atttctgaaattttgcaacgttttggttataatagtgcggctttaaatggggatatgaat
caatctgtacgttgtaaaacaatatctcgtctacggtgtggtacgttggatatattgata
accactgatgttgccgctcgtggattggatattaatcgtattagttttgtaattaattat
gatattccatgtaattataatgcttacgtacatcgtatcggaagaacaggtagagctggt
cgttctggaaaatctttgttatttgtagaacgtcaagaatatcatttatttaattatgtt
attaaaagaagagtattaaattctaatattgtgaaagttaaatgtcctacatcgaatgat
ttggtacgttgtcgattaaaaaaatttactgataaagtagtaaataatttggaatctaaa
gatatagaacagtatcaatctttattagggaaaataaagattgacttggatataactata
gaaaaattagctgccattttattaaaaatagcacaaggtagtcaatcattaataatatca
tcagatgatcaaagaataaataaaaaaataatttattataataaatctgatttaaaaaaa
aattctgcgcataaaaataaaagttattttgtacattctcgtcgatcaataaaatgtagc
aatgtatattataaaaaaaaataa
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