Candidatus Blochmanniella floridana: Bfl586
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Entry
Bfl586 CDS
T00138
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bfl
Candidatus Blochmanniella floridana
Pathway
bfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bfl586 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfl03021
]
Bfl586 (rho)
03019 Messenger RNA biogenesis [BR:
bfl03019
]
Bfl586 (rho)
Transcription machinery [BR:
bfl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Bfl586 (rho)
Messenger RNA biogenesis [BR:
bfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bfl586 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
S1CSD-TOTE-2
AAA_25
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
CAD83264
UniProt:
Q7VRM2
LinkDB
All DBs
Position
complement(653430..654689)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTKLKNIPVSELVTLGESMGLENLARMRKQDIIFAIFKQHAKTGEDIFGDGVLEILQD
GFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNDVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSISHNYPDCVLMVLLIDERPEEVTEMQRLVHGEVIASTFDEPASRHV
QVSEMVIEKAKRLVEHKKDVIVLLDSITRLARAYNTIAPSSGKVLTGGVDANALHRPKRF
FGAARNMEEGGSLTIVATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTPDELQKIWILRKIIHPMGEIDAMEFMMNKLSMTKTNDEFFDMMKRC
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttactaaactaaaaaatataccagtttctgagttagtgacactcggggaaagt
atggggttggaaaatttggcacgtatgcgaaaacaagatattatttttgcgatttttaaa
caacatgctaaaactggagaagatatttttggagatggagtattggagattttacaagat
ggatttggatttcttcgatctagcgatagttcttatttggcgggaccagatgatatttat
gtatctcctagtcagattaggcgttttaatttacgtactggagatactatttcaggtaaa
atcagacctccaaaagaaggtgagcgttattttgctttgttaaaagttaatgatgttaat
tatgataaaccggagaatgctcgtaataagattttgtttgaaaaccttactcctttacat
gctaattctcgattacgtatggaaagaggtaatggttcaacagaagatttgacagcaaga
gtattggatttagcatctcctataggtagaggtcaaagagggttgatcgtggctcctcct
aaagctggtaaaactatgttattacaaaatattgctcaaagtattagtcataattatccg
gattgtgtacttatggttttgttaattgatgaaagaccagaagaagttactgaaatgcaa
cgtttagtgcatggagaagtcattgcatcgacttttgatgaacctgcatctcggcatgtc
caagtttcagaaatggttattgaaaaagctaaaagattagtagaacataaaaaggatgtt
attgttttgttagattctattactagattagcaagagcttataatactatagctccttca
tctggtaaggtattaactggaggagtagatgctaatgctttgcatcggccgaaacgtttt
tttggagccgccagaaatatggaagaaggagggagtttaacgattgttgctactgctttg
attgatactggttcaaagatggatgaggttatttatgaagaatttaaaggaaccggtaat
atggaattacatttatcaagaaaaattgctgaaaagcgtgtatttcctgctattgattat
aatagatctggtactcgtaaggaagaattattaactactcctgatgagttacaaaaaata
tggattttaaggaaaataattcatccaatgggtgagatagatgcgatggagtttatgatg
aataaattatctatgactaaaactaatgatgagttttttgatatgatgaagcgttgttaa
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