Brevibacillus formosus: BP422_02170
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Entry
BP422_02170 CDS
T04939
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bfm
Brevibacillus formosus
Pathway
bfm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BP422_02170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfm03400
]
BP422_02170
Enzymes [BR:
bfm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BP422_02170
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BP422_02170
DNA repair and recombination proteins [BR:
bfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BP422_02170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF7573
Ribosomal_S13
Zn_ribbon_SprT
DUF1583_N
Motif
Other DBs
NCBI-ProteinID:
ASJ52452
UniProt:
A0A220MBV0
LinkDB
All DBs
Position
416549..417376
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AA seq
275 aa
AA seq
DB search
MPELPEVETVVRTLRGLVMGKRIESVSVHLARIVRQPDDVEAFKSLLVGQTIQDIQRRAK
FIQFFLNEDVLVSHLRMEGRYGVYQADDPVEKHTHVVFHFTDGTELRYRDVRQFGTMDLF
PKGKETTVGPLAKLGVEPLDKSFTPEVLGKLLKGRSTKIKPLLLNQECIVGLGNIYVDES
LFKAGIHPEKPAGKLNDKEVTRLHESIVSTLQEAVEQGGSSIKSYVNGQGEMGMFQQSLL
VYGRKDEACTKCGTEIIRFVVGGRGTHICPDCQKL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattgccggaggtagaaaccgtcgtacggactctgcgtggcttggttatggga
aaaaggattgagagcgtaagtgttcatttggcacgtattgtgcgtcagccagatgacgtg
gaagctttcaaatctctcttggtgggacaaaccattcaggatatccaacggcgggcaaaa
ttcattcagtttttcttaaacgaggacgtgctcgtgtcccatctgcgcatggaagggcgt
tatggtgtgtatcaggcggatgatcccgttgagaagcatacccatgtcgtcttccatttt
acggacggaacggagctgcgttatcgggatgttcgccagttcgggacgatggatctgttc
cctaaggggaaggaaacaactgtcggacctttggcaaaactgggggtagaaccgctagat
aaaagttttactcctgaagttttggggaaattgttaaaaggacggtcaacaaaaattaag
ccgcttctcctaaaccaggaatgtattgtagggctggggaatatttatgtggacgagtca
ctctttaaagcaggcattcatccggagaaaccagcaggcaagctgaatgataaagaagtt
acccgactgcacgaaagcatcgtctccactttgcaagaagcggtagaacaaggtggtagc
tccatcaagtcgtatgtgaacggacagggcgagatgggaatgttccagcaatctctatta
gtttatggacgaaaagatgaggcatgtacgaagtgcggaaccgaaatcattcggtttgtg
gtcggcggcagaggaacgcatatttgtcccgattgtcaaaagttataa
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