Brevibacillus formosus: BP422_11640
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Entry
BP422_11640 CDS
T04939
Name
(GenBank) RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bfm
Brevibacillus formosus
Pathway
bfm03420
Nucleotide excision repair
bfm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BP422_11640
03430 Mismatch repair
BP422_11640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfm03400
]
BP422_11640
Enzymes [BR:
bfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BP422_11640
DNA repair and recombination proteins [BR:
bfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BP422_11640
MMR (mismatch excision repair)
Other MMR factors
BP422_11640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C_2
AAA_16
SLFN-g3_helicase
AAA_30
ResIII
DEAD
NACHT
YwqH-like
BHD_2
DUF4175
DUF3536
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ASJ54142
UniProt:
A0A220MGS9
LinkDB
All DBs
Position
complement(2650126..2652375)
Genome browser
AA seq
749 aa
AA seq
DB search
MSTQHRDYELEQKKLDETISAIDEEMEQLRNDIREATDDYVKQVVNNKKAKDLRYLEDQG
REKPYFGRVDFLKDEIYELDQVYIGKRGIVRSDTFDSVVVDWRAPIASLYYSGESKDAFY
RMGREIVRGEVRLKRNFAIEDGKIVGIYDGAVKETINREMGHPDEFLQEGFIDEFLAANL
NQANDSRLKDIVATIQSEQNDIIRAEKERPIVVQGVAGSGKTTIALHRLSYLIYNYQDSM
MSKKFMVFAPNRMFLTYISEVLPELGVDDVQQSTFVDWAARLVKPLLPKGWRIVSPDKPL
QLFFEEGQDERQQEMTRNRLRFKGSLACREALEQYIRHIVETRIPFKKLSFLYNKTKQVF
SIPGEFIRQCFLEQFANMPYHRRVEALRKHLKQEMNKQLFAHLRERKVDLDKEGLYKFEK
MLEQILDTYLTSFPRLEIFAAYRELIADEELLRKLVPADISDEVVRDVTQSSAALFAEER
LEPEDIAPLLYLQHIVEGMNKAEHFDHTVVDEAQDLSALEIAVIALATKRNSLTIVGDIA
QGIHSYRGIHAWEELTKGIFAQLFPSYYTLSQSYRSTIEIMRCANEVLRQIELPEAVLAK
PVLRHGEKPIMVKARSRAQLWEDISSRVAAYQSEGYKTIAIVAKTIQASKKAHKGLQDKI
ADLTLLGSKDNQFPGGVTVMPAFLTKGLQFDVVIILDVDAYQNNEWDAKLLYVAMTRPVH
RLVMTQVDEVSSPLLKDLPAALYTMATDE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacacagcatcgtgattatgaattggaacaaaaaaagctggatgaaaccatttca
gcgattgacgaagaaatggagcagcttcgcaatgatattcgcgaggcaacagatgactat
gtaaaacaggtcgttaacaataaaaaggcaaaggatttgcgctacctggaagatcagggt
cgagagaagccttatttcggcagagtggatttcttgaaggatgaaatctatgagctggac
caggtctacataggaaaacggggaattgtacgcagtgatacgtttgattctgtcgtcgtg
gattggcgtgcgcctatcgccagtctttattattccggtgagagcaaagacgcgttttat
cggatgggacgcgagatcgttcgtggtgaagttcgattaaagcgtaattttgcgattgaa
gacggaaagatcgtcggcatctatgatggagcggtaaaagaaacgattaaccgcgaaatg
gggcatcccgatgagtttttgcaagagggcttcatcgatgaatttttggcagccaatctg
aatcaggcgaacgatagcaggcttaaagacatcgtcgctacgattcagtccgagcaaaat
gatattatccgggcggaaaaagaacggcccattgttgtgcaaggagtagcggggagcgga
aaaacgaccattgcgctgcatcgactctcctatttgatttataactaccaggattccatg
atgtccaaaaaattcatggtgtttgcaccaaaccggatgtttcttacctatatatccgag
gttttgcctgagctgggagtcgatgacgttcaacagtctacctttgtagattgggcagcg
cgtctcgtgaagcctctgctgcctaaaggatggagaatcgtgagtcccgataagcctctt
caattgttcttcgaagaggggcaggatgagcgccagcaagaaatgacgcgaaacaggctt
cgcttcaaaggatcgctcgcttgtcgggaggcgctggagcaatatattcggcatatcgtc
gaaacgagaatcccttttaagaagctcagctttttatacaacaaaacaaagcaagtcttt
tccattccgggtgaattcattcgccaatgcttcctggagcaattcgccaatatgccgtat
catcgacgggtagaagcgcttcgcaagcatttgaaacaagaaatgaacaagcaattgttt
gcccatttgcgagaacgaaaagtcgatttggacaaagaaggcttgtacaaattcgagaaa
atgctggagcaaatcctggatacctacctgacttcgtttccaagactggaaatcttcgca
gcttatcgcgagttgattgctgacgaggaattgctacgaaagctcgtacctgctgacatt
tcagatgaagttgtgcgtgatgtgactcagtcaagtgctgcgctgtttgcagaggagaga
ttggagccggaagatatcgcgccgttgttatacttgcagcatatcgttgaaggaatgaat
aaagcagagcattttgatcatacggtcgtagatgaagcacaagacttgagtgcgttagaa
atagctgtcattgcattggcaacgaagcgaaactcgctaacgatcgtgggagatattgcg
caaggcattcatagctaccgggggattcatgcctgggaagagttgacgaaggggattttt
gcacagctgtttccttcctattatacgttgtcgcaaagctatcgttcgacaattgagatc
atgcgctgtgccaatgaagtgttgcggcaaattgaattgcccgaggcggtattggcaaaa
ccggttttgcgtcatggtgaaaaaccaatcatggtcaaggctcgttcgcgagcgcaactg
tgggaggacatctcttcgcgtgtggctgcctaccagtcggaaggctacaaaacgattgcg
atcgtagcgaagaccattcaagcgagtaaaaaagcacataaaggactgcaagacaagata
gctgatctgactctgttaggcagcaaggataaccaatttccgggtggcgtaaccgtcatg
cctgcttttttaacaaaaggcttgcagttcgatgtggtcattatactggatgtggacgcc
tatcaaaataatgaatgggacgcaaaactgttgtatgtcgcgatgacacgtccggtccat
cggcttgtgatgacgcaagttgatgaagtttcttcaccgttgctgaaagatttaccggca
gcgctgtacaccatggctactgacgaataa
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