Brevibacillus formosus: BP422_12525
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Entry
BP422_12525 CDS
T04939
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bfm
Brevibacillus formosus
Pathway
bfm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BP422_12525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfm03019
]
BP422_12525
03016 Transfer RNA biogenesis [BR:
bfm03016
]
BP422_12525
Enzymes [BR:
bfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BP422_12525
Messenger RNA biogenesis [BR:
bfm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BP422_12525
Transfer RNA biogenesis [BR:
bfm03016
]
Prokaryotic type
tRNA degradation factors
BP422_12525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
KH-I_KHDC4-BBP
ATP-grasp
OB_RRP5_4th
S1_RRP5
SPATA25
Vip3A_N
Motif
Other DBs
NCBI-ProteinID:
ASJ54302
UniProt:
A0A220MH77
LinkDB
All DBs
Position
complement(2817087..2819234)
Genome browser
AA seq
715 aa
AA seq
DB search
MEQQYRTYDFELAGRKLTLEFGKMAKQAHGSVLVRYGDTAILSAVTVSKEPKPLDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPVRPLFAEGFRNDVQIVNTVLSV
DQDCSPEIAAMIGTSAALCVSEIPFEGPIAGVIVGRIDGEFVINPTVAQAEKSDIHLTVA
GTHKAINMVEAAANQVPEAVMLEAIMAGHDVIKQLVEFQHMIVSEIGKQKMEVILHEVNP
EIDQAVREFAEARLKEAVRIEEKQARYDAIDDIKAETKEHFAAKDPEAYPEQEKMISEVL
GNIVKDEVRRLITEEKVRPDGRALHEIRPLSSETNILSRTHGSAMFTRGQTQALSVCTLG
ALGDVQILDGLGLEESKRFMHHYNFPPYSVGEARPLRPPGRREIGHGALGERAIEPIIPS
ETEFPYTIRLVSEVIESNGSTSQASICASVLALMDAGVPIKAPVAGIAMGLIMSKDEKSF
SILTDIQGMEDHLGDMDFKVAGTEAGVTAIQMDIKISGINREILELALEQARVGRLHILN
HMMSTISEPRKELSPYAPKIMTMTINPEKIRDVIGPQGRVINKIIEETGVKIDIEQDGRV
FIASINHEANLRAKQIIEDLVREVAVGQVYLGTVKRVEKYGAFIELFAGKEGLCHISQLA
EERVAKTEDVVAVGDKVEVKVTEIDDQGRVNLSRKAVLKEQAAAAQAAETPTKAE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacaataccgtacatatgacttcgaactggcaggccgaaaactgaccctggaa
tttggcaaaatggctaaacaggcgcatggttcggtcttggttcgttacggcgatacagca
atcctgtctgcagttacagtctcgaaggaaccaaaaccacttgacttctttccactgact
gtcaactatgaggagcgtctctatgcggttgggaaaattcctggcggctttattaaaaga
gaaggacgtccaagcgaaaaggcgattttggctagccgcttgattgaccgccctgtccgc
cctctttttgcagaaggattccgtaacgatgtacaaatcgtaaatactgttctgtctgtg
gatcaagactgctcacctgaaatcgctgcgatgatcggtacttccgcagcgctatgcgtc
tcggagattccttttgaaggcccgattgcaggagtaatcgtaggacgaattgacggcgag
ttcgtcattaaccctactgtagctcaagcagagaaaagcgatattcacctgactgtcgca
ggtacgcacaaagcgattaacatggtggaggcagctgcgaaccaagtaccggaagcagta
atgctcgaagcgatcatggctggtcatgacgtgatcaagcaactggtagaattccagcac
atgatcgtgtccgaaatcggcaagcaaaagatggaagtcatcttgcatgaggttaatcct
gaaatcgatcaagctgtacgtgaatttgcggaagctcgcctgaaagaagctgttcgcatc
gaagaaaaacaagcgcgctacgatgcgattgacgatatcaaggcagaaaccaaagagcat
tttgcagccaaggaccctgaggcatatccagagcaggaaaagatgattagcgaagtactt
ggcaatattgtcaaggatgaggttcgccgtctgattacggaagagaaagttcgccctgat
ggacgagctttgcacgaaatccgtccgctgtccagtgagacaaacattctttcccgtaca
catggctctgctatgtttacccgcggtcagacgcaagcgctgagcgtttgtacattgggc
gcgttgggagatgttcaaattctcgatggactcggtctggaagaatcgaagcgtttcatg
caccactacaacttcccgccgtatagcgtaggtgaagcacgtccgttgcgtcctccaggg
cgtcgtgaaatcggacacggtgcgttgggtgagcgtgcaattgagccgatcattccatct
gagacagagttcccatacaccatccgtctcgtgtcagaagtcattgaatccaacggttcc
acatcgcaagcgtcgatttgcgcgagcgtacttgccttgatggatgcaggtgtaccgatc
aaagctccggtagcaggtattgcgatgggcttgatcatgagcaaagatgagaaatctttc
tcgatcctgactgatattcaaggtatggaagatcatttgggagacatggatttcaaagta
gcgggtacagaggctggtgtaacagctatccaaatggacatcaaaatttccggtatcaac
cgtgagattttagagctggccttggagcaagcgcgtgtaggtcgtttgcacatcctgaac
catatgatgagcacgatttctgaaccgcgtaaagaactgtctccttatgcaccaaaaatc
atgaccatgacgatcaatccggagaaaattcgcgatgtaatcggtccacaaggtcgtgtc
atcaataaaattatcgaagaaaccggcgtaaaaatcgacatcgaacaagatggaagagtc
ttcatcgcatccatcaaccacgaagcgaatctgcgcgcgaaacaaatcattgaagatctg
gttcgtgaggtagctgttggtcaggtgtacctgggaacagtaaaacgcgtagagaagtac
ggtgcgttcatcgagttgttcgcaggtaaagagggcttgtgccacatctctcaactggct
gaagagcgtgtagccaaaacagaggatgttgtcgcagttggtgataaagtagaagtaaaa
gtaaccgagatcgacgaccaaggtcgtgtgaatctctctcgcaaagcagttttgaaagaa
caagctgctgcggcacaagctgctgaaacaccaacaaaagcagaataa
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