Brevibacillus formosus: BP422_12540
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Entry
BP422_12540 CDS
T04939
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bfm
Brevibacillus formosus
Brite
KEGG Orthology (KO) [BR:
bfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfm03016
]
BP422_12540
Enzymes [BR:
bfm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BP422_12540
Transfer RNA biogenesis [BR:
bfm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BP422_12540
Prokaryotic type
BP422_12540
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ASJ54304
UniProt:
A0A220MGU2
LinkDB
All DBs
Position
complement(2820849..2821775)
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AA seq
308 aa
AA seq
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MSNVNGVLVIDKPAGMTSHDCVARIRRLYGTKKVGHTGTLDPDVTGVLPICVGHATRLVE
YLQELPKRYDVVMRLGSATTTEDASGEVVEQTRVDAASITTERIQALFESFLGEMEQVPP
MFSAVKVNGKRLYDLAREGTVIERQARKVTLYELTLHKISVDGDTVDVAFTCTCSKGTYM
RTLCVDLGRALGYPAHMKLLRRIKSGPFQEQEAIPLQQIEEQAANGEDISRHLVSIPQAI
SFLPSFQVKPERIKAVRNGLATALPGVTAEEGSLICLFAGEELLGIHRVCRGDKGLFAKP
EKVFPAEV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgtgaacggcgtgctggttatcgataagccagctggtatgacctctcatgat
tgtgtagcacgtattcgtcgattgtatggaacgaaaaaggtggggcatacgggtacactg
gatccagatgtgacgggtgtactccccatttgtgtgggacacgcaacgaggctagttgaa
tatttgcaggagctgcctaagcgctatgatgtagttatgcgcctcggctcagctaccacg
acggaagatgcttccggagaagtggtggagcaaacaagagtagatgcagcatcgattacg
acggagcgtattcaagcgctgttcgaatcctttttgggtgaaatggagcaggtacctccg
atgttctctgcggtaaaggtaaacggcaagcggctgtacgacctggctcgtgaaggcacg
gtgatcgagcggcaggcacggaaagtgacgctgtatgagctgacactccataagattagc
gtggatggggacactgtcgatgttgcattcacgtgcacgtgctccaaaggcacatacatg
cgcaccttatgtgttgacctcggacgcgctctgggttatcctgcccatatgaagctgttg
cggcgaataaaaagcggtccgttccaggagcaagaggcaatccccctccagcaaattgag
gaacaggcagcaaacggggaagacatttcccgccacttagtctccatccctcaggcaatc
tcgttcttaccatcttttcaggtcaagcctgaacggatcaaagcagtacgtaatggactt
gcgactgcgcttccgggcgtcactgcggaggaaggaagtttgatttgcttgtttgcgggg
gaagaattacttggcattcatcgcgtatgccgtggagacaaaggacttttcgccaaacca
gaaaaagtctttccagccgaggtgtaa
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