Brevibacillus formosus: BP422_15890
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Entry
BP422_15890 CDS
T04939
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bfm
Brevibacillus formosus
Brite
KEGG Orthology (KO) [BR:
bfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfm03016
]
BP422_15890
Enzymes [BR:
bfm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BP422_15890
Transfer RNA biogenesis [BR:
bfm03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BP422_15890
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ASJ54914
UniProt:
A0A220MIK6
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All DBs
Position
complement(3510197..3510793)
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AA seq
198 aa
AA seq
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MRLFIALDIPAEAAAYIADVQKRLKQDIKADRWQSLANLHLTLHFLGEVDESLVPAICED
MDIVSAIIQPITLRVGSFGVFPNALHPCVLWLGLRGQLSSLKQLHLLLGRRFELHEGLSY
DRKRYRPHITLARGPHHSGDELALLDWNERYLAQEPPQWKAQHFHLYRSELLREGAVHTI
IHTSTFDKDHSKKQALPE
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttattcatagcattggatattccagctgaggctgccgcttatattgccgatgtt
caaaaacggttgaagcaagatatcaaggcagacaggtggcagtctctcgctaatttgcat
ttgactctgcattttcttggtgaagtggatgagtcgctcgtacccgccatctgcgaagac
atggatattgtcagcgcgatcatccagccaattaccctgcgtgttggcagctttggggtt
tttccgaatgctctgcatccatgtgtgctgtggctgggactgcgcggtcaactttcttct
ctcaagcagctgcatttattgttgggcagacggttcgaattgcacgaaggcttatcctac
gatcggaagcggtatcggccacatattacgctggcacgtggtccgcatcacagtggggat
gagcttgcccttttggattggaatgaacgttatttagcgcaggagccgccgcaatggaag
gcacagcatttccatttgtatcgttccgagcttttgcgggagggcgcggtacatacgatt
atccacacgagcacgtttgataaagatcacagcaaaaaacaagcgttgcctgaatag
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