Brevibacillus formosus: BP422_16080
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Entry
BP422_16080 CDS
T04939
Name
(GenBank) 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bfm
Brevibacillus formosus
Brite
KEGG Orthology (KO) [BR:
bfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfm03019
]
BP422_16080
Messenger RNA biogenesis [BR:
bfm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BP422_16080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
ASJ54948
UniProt:
A0A220MII5
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All DBs
Position
complement(3552018..3552965)
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AA seq
315 aa
AA seq
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MKYLLDYQEGERVVAFCLIKNKEAGVASNQSEYLNLELGDRSGTIMAKLWDVNAEMKEWI
HVKSVVKIDAAVQMYRGKKQLVIQRIRPAAASDEVQMESLIPISPVPVDELWTKLTHAVD
SLQSATLKAIIQEALATEEIQDRLRHYPAGVRMHHNYYHGLLEHIVSLLTAAQSLLPLYP
QVDRDVLIATCILHDIGKLYELSDPIAPDYTTPGQLIGHLVMGVEMVSGICRKLDISLGD
AEVLHLKHCILSHHGEVENGWGSAVSGKTPTAVMFHYLDQIDSKMNALSQTLADMTEEEE
WAYAGVLRRKVWRGY
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatttattggattatcaagagggagagcgtgttgtcgctttttgcctgattaaa
aacaaggaagcgggcgtagcgagtaatcagagtgaatacttgaatctggaactgggagat
cgctccggtacgatcatggcaaagctgtgggatgtcaatgcagaaatgaaggaatggatt
cacgtcaagtctgtcgtgaagatcgacgcagccgtccaaatgtatcgggggaaaaagcaa
ctggtgattcaacggatcagaccggctgcggcttcagacgaagttcagatggagtcgctc
attccgatctcgccagttccagtagatgaactgtggacaaagcttacccatgcagtcgac
agcctgcaaagtgctacgctcaaggccattattcaagaggcgctggcaacagaggagatt
caggatcgccttcgccattatccggctggcgttcgcatgcaccacaactattatcatgga
ttgctcgagcatattgtctctttgttgacggcggcacagagcctcttgccactgtatcca
caagtagacagggatgtactgattgcgacttgtatcttgcacgatatcggaaagctgtac
gagctatctgatcccatcgccccggattacaccacgccaggtcagttaattggtcacctg
gtcatgggagtcgagatggtgagcggcatttgccgcaagctggatatttccttaggggac
gcggaggttctgcacttgaagcattgcattttgagtcatcatggagaggtagagaacggc
tggggcagtgctgtatctggaaaaacgcctacggctgtcatgttccattacctggaccag
attgacagcaaaatgaatgctttgagccaaacactagcggacatgacggaagaagaggaa
tgggcgtacgctggcgtgcttagacgaaaagtctggcgcgggtattaa
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