Brevibacillus formosus: BP422_20640
Help
Entry
BP422_20640 CDS
T04939
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bfm
Brevibacillus formosus
Brite
KEGG Orthology (KO) [BR:
bfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfm03400
]
BP422_20640
Enzymes [BR:
bfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BP422_20640
DNA repair and recombination proteins [BR:
bfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BP422_20640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_22
AAA_12
DUF6601
AAA_30
ResIII
AAA_11
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ASJ55747
UniProt:
A0A220MKX9
LinkDB
All DBs
Position
complement(4467551..4471378)
Genome browser
AA seq
1275 aa
AA seq
DB search
MADQELQAKPEQWTDEQWQAIIQRGNNLLVAAAAGSGKTSVLVERIIRRIMDEKDPVGVD
QLLVVTFTNAAAAEMRHRIGDALRKALKDAPHSSHLRRQLALLQRATITTLHSFCLGILR
QYYYLIDLDPDFRIADQMEGELLRQDVLEEQLESWYENDADFHALADVMLDGQDDHALTI
LLLRLYEFSRSHPAPEQWLGEAAGMFAVHDKNGLDGLEWTRSVLRSVELALGGMTAKMRR
AVLLAGSPEGPAGYLPLLEAEAAALQRAGAACRDGWEATVEAVRGVVFAKLPPVKGTDPL
VKEQVQDLRNSVKKELAEQIEQYFSTTAEQYVADLQRIAPHMQTLAKLVTAFSDAFQLEK
RSRGLVDFGDLEHLALRVLTETNESGETVPSSISAQLRKQFAEVLVDEYQDINLVQETIL
QMVSRDGANGQPANRFMVGDVKQSIYRFRLAEPKLFLEKYVTYQKDGEADEASIGRRIDL
AANFRSRREVVDAVNFLFRQIMSHGVGEIGYDPSAELINRASYPEAQPNRLQAEMHLIDR
NTAIAEEGQAVVAEGTDEGEAGIPEGESAEEASVAQLEARLIASRIRRWMEPGEGEEPLL
VFDKKAGGMRPLAYRDIVILLRATSGWGQTMQEELHAAGIPVYAEQTAGYFAATEVETML
SLLRVIDNPLQDIPLAAVLRSPIVGLREEQLAQIRIHYATGPFHQAVLQYAEERQPQESW
ERRLRQFFVRLDLWRTEARRGALSELLTLLYRETGYLDYVAALENGQQRQANLRALYDRA
RQYEAGSYRGLFRFLRFVDRLQEAGNDMGEARTIGENEDVLRIMTIHKSKGLEFPVVFVA
GMGKQFNTMDLKSQFLLHKDLGFGPMAVEPSLQLRYPSLAALGIRQKLRRDMLAEEMRVL
YVALTRAREKLILVGSSKDLAKSVTDWGRQDDSERLSDEDLIQAKGYLDWVGRAMLRHPG
AGLLRAYPEQQGSGEVVRVRSVPDDSVWSFHFYQADELRAQGESTNDEASLWERMTRREA
IAERPSDDMLREIVDKRLGWQDPHPIAPRVAAKWSVSELKRHAKVSKDGQPLTLPSITEK
PKFLSEQKSNRLTAAEKGTLTHLVFQHLDLKRPLDEADIREQVTALAARRFLTDEQVQAV
DVSQIARFFADPLGQRMKSAAVVHRELPFTLVLPAYEVEAELGEESDEKVVVQGVIDCLL
EEQDGSLVLIDFKTDWMAKEATALAIEEMKRRYEGQIRLYVRAIKQIIKPKGNVSSYLYL
LSGGFSLSFSDESME
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaagagttgcaggccaagcctgaacaatggacggacgagcaatggcaagcg
attatccagcgcgggaataatctcctggtggcagctgcggcaggctctgggaaaacctca
gtcctggttgagcggattatccgacgcatcatggacgagaaggacccggttggagtcgat
cagctgttggtggtgacctttaccaatgcggcagcggcagagatgcgtcaccggatcggc
gatgcattgcgaaaagcattgaaagatgccccgcactcttctcatctgcgtcgacaactg
gcactgctccagcgggcgacgattacgacacttcactcgttttgcttgggaattttgcgc
cagtattactatctgattgatctcgatcctgattttcgcattgccgatcagatggaaggg
gagcttttgcggcaggatgtgttggaggaacagctggagagctggtacgagaatgacgcg
gattttcatgcattagctgatgtgatgctggacggtcaggacgaccatgccctcaccata
ctactactcaggctgtatgagttttcgcgcagtcatccggcaccagaacaatggctcggg
gaagcggctggaatgtttgcggttcacgataaaaacggtctggacgggctggagtggact
agaagcgtgctgcgttctgtggagctggcactcggtggaatgaccgctaagatgcgtagg
gcagttctactggctggctcaccggaagggcctgctggctatttgccattgcttgaggcg
gaagcggctgccctgcagcgtgccggagcggcttgcagagatggctgggaagcgaccgtc
gaagctgttcgaggagttgtatttgccaagctgcctccggtgaaaggcacagatccgctc
gtgaaggaacaggtgcaagaccttcgaaacagtgtgaaaaaggaactggccgagcaaatc
gagcaatacttttctacgacagccgagcagtacgtcgcggatttgcagcggattgctcct
cacatgcagacattggccaagctggtgacagcattttcggatgcttttcaattggagaag
cgctcgcgtggcttggtcgactttggcgacttggagcatctggcactgcgtgttctaacc
gaaacgaatgagtccggggagactgttccttcgtctatatctgcccaattgcgcaaacaa
ttcgctgaagtgctggtagacgagtatcaggatatcaacctcgtgcaggagacaatcttg
caaatggtttcccgagacggagcgaatggtcagccagcgaatcgcttcatggtaggggat
gtgaagcagagtatttatcggttccgcttggcagagccgaagctgtttctcgaaaaatat
gtgacctatcaaaaagatggtgaagctgatgaagctagcatcggtcggcgtatcgatctg
gcggcgaacttccgcagtagaagggaagtcgtagatgccgttaactttttgtttcgccag
atcatgtctcacggggtaggtgagattggttatgatccttcggcagagctgatcaaccgt
gcgtcttatccagaagcacagccgaaccgtttgcaggcagagatgcatttgatcgaccgg
aatacagcgatagcagaagaaggtcaggcggtagttgcagaggggacagatgagggcgaa
gcaggtattcccgagggagagtccgcagaggaagcgagtgttgcacagctggaagctcga
ctaatcgccagccgtattcgtcgttggatggagccaggcgagggagaagagccgctgctc
gttttcgataaaaaggcagggggaatgcgcccgctggcctatcgcgatatcgttattttg
cttcgtgcgacctcaggctgggggcagacgatgcaagaggagctgcacgcggcaggaatt
cccgtatatgcggagcagactgcgggttatttcgcggcgactgaggtagaaacgatgcta
tccttgctgcgtgtcatcgacaacccgctccaagacattccactggcagcagtattgagg
tcccccatcgtcggcttgcgggaggagcaacttgctcaaatccgcattcactacgcgaca
gggccgtttcatcaagctgttctccaatatgcagaagaacgccagccccaagagtcgtgg
gagagaaggctgcgacagttctttgtccgattggatctatggcggacagaggctcgcaga
ggtgctttatccgaactgctgacgttgctgtaccgggagacaggctatctcgattatgtg
gcggctctggaaaacggtcagcagcgacaggccaacttgcgggcgctctatgatcgcgca
agacaatacgaagctggctcctatcgtggcttgttccgctttttgcgttttgttgatcgt
ctgcaagaagcgggcaatgatatgggcgaagcaagaaccatcggggaaaacgaggatgtc
ttacgcatcatgacgatccacaaaagtaaggggctcgagttcccggttgtttttgtggcg
ggtatgggcaagcagtttaatacgatggatttgaaaagccagtttttgctgcataaagat
ttgggctttggcccgatggctgttgagccctccttgcagctgcgctatccgagtctggct
gcgctgggcatccggcaaaagctgcgtcgggatatgctggcagaggaaatgcgtgtgctt
tatgtggctttgacgcgtgcacgcgagaagctcattcttgtcggttcatccaaggatctc
gcaaaaagtgtaacagattggggcagacaggatgacagcgagcggctcagtgacgaagac
ttgattcaggcaaagggatacctggattgggtggggcgtgcgatgctgagacatcctggt
gcaggattgctgcgggcatatccagagcagcaaggctcgggagaagtcgtgagagtcaga
agtgtgccggatgattcggtttggtcgtttcacttctatcaggcagatgagctccgtgcc
caaggagagtcaaccaacgacgaggcgtctctgtgggagcgcatgaccagacgagaggcg
atcgcggaaagaccgtctgatgacatgttacgagagattgtcgacaagagattaggatgg
caggacccgcatccaattgcgccacgcgtagctgcgaaatggagtgtcagcgaactcaag
cgacatgccaaagtcagcaaagacggacagccactcacgctgccgtccattacggaaaag
ccaaagtttttgtctgagcaaaaatccaatcgactgacagcagcagaaaaggggacactt
acgcacttagtgttccagcatctcgatttgaaacgtccgctggatgaagcagatattcgg
gagcaggtgacggcactcgcggcacgccgctttttgactgacgagcaggtacaagcagta
gatgtttcccagatcgcccgattcttcgctgatcctttggggcagcgaatgaagtcggcg
gcggtcgtgcatcgtgaattgccttttaccctcgtgctgccagcttatgaagtagaagcg
gagttaggtgaagagagcgacgagaaggttgtcgtccaaggggtcattgattgcctgttg
gaggagcaggatggaagcctcgtcctgatcgatttcaagacagattggatggcaaaagag
gcgactgccttagccatcgaagagatgaagagaagatacgaaggccagatcaggctatac
gtccgggcaatcaagcagatcattaagccaaaagggaacgtttctagttatctttattta
ctctcaggtggattctctttatcgttttcggatgaaagcatggaatag
DBGET
integrated database retrieval system
