Brevibacillus formosus: BP422_23770
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Entry
BP422_23770 CDS
T04939
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bfm
Brevibacillus formosus
Pathway
bfm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BP422_23770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfm03019
]
BP422_23770
03009 Ribosome biogenesis [BR:
bfm03009
]
BP422_23770
Enzymes [BR:
bfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BP422_23770
Messenger RNA biogenesis [BR:
bfm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BP422_23770
Ribosome biogenesis [BR:
bfm03009
]
Prokaryotic type
rRNA helicases
BP422_23770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASJ56313
UniProt:
A0A220MMW1
LinkDB
All DBs
Position
complement(5152853..5154391)
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AA seq
512 aa
AA seq
DB search
MATFNDFGLHHSIVRALSNMGFEEATAIQDQTVPVALQGRDLIGQAQTGTGKTAAFGIPL
IERMDETSGNIQGVVLTPTRELAVQVAEEINKIAQFKNISALPIYGGQDITRQIKALKKR
PQIIVATPGRFMDHMRRRTIRLDAIEVVVLDEADEMLNMGFIDDIKEILKEVPESRQTLL
FSATMPRAIQEIAQQFMNEPTIIQVKAKEVTVPNIEQQYMEVAERQKFDVLCRLLDIHSP
ELAIVFGRTKRRVDELSEALTKRGYGAEGIHGDLNQAKRDSVLRKFKEGTIEVLVATDVA
ARGLDISGVTHVFNFDIPQDSESYVHRIGRTGRAGKTGLAITFVTSREIDHLRLIERTTK
RRMERHAVPSMAEALEGQQKMTVDKILEASGRDDLSAYKTLAEQLLEDVDSVTLVSAALK
LLTKEPDTTPVRLTEEAPLRVGKKKLPPKGKGGFGSGSGFGGKRPSRPRNGEYRPRGGES
RPRSGESRPRSGESRPRSGDSRPRGEARPPRS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
ttggcgacttttaatgattttggcttacaccactccattgttagagcattgagcaacatg
ggcttcgaagaggctacagcgattcaggatcaaacggttcctgtagcactgcaaggtcgt
gacctgattggtcaagcacaaactggtacaggtaaaacggctgcatttggtattccgctg
attgaacgcatggatgaaacaagcggaaatattcaaggggttgtattgaccccaactcgt
gagctggctgttcaggttgcagaagagattaataaaattgcccaatttaaaaacatctct
gccctgccaatctacggtggtcaagacatcacgcgtcaaatcaaggcgttgaaaaaacgc
ccgcaaatcatcgtagcaacacctggtcgtttcatggaccacatgagaagaagaacgatt
cgtctggatgccatcgaggtagttgttttggacgaagcggatgaaatgctgaacatgggt
ttcatcgacgacattaaggaaatcttgaaagaggttccagaaagtcgtcaaaccctgctg
ttctccgcaacgatgccgagagcgatccaggaaatcgcccagcagttcatgaacgaacca
accatcattcaagtgaaagcaaaagaagtaaccgtaccaaacatcgagcagcaatatatg
gaagtagcagaaagacaaaagttcgatgttctgtgccgtttgctggatattcattcgcct
gagctggctatcgtattcggtagaaccaagcgcagagtggatgagctgtccgaagcactg
accaagcgtggttatggagcagaaggtatccacggagacctgaatcaggcaaaacgcgac
agcgtactgcgcaagttcaaagaaggtacaatcgaagtattggtggcgactgacgttgca
gcccgcggtctggacatcagcggtgttacgcacgtattcaactttgacattccacaagac
tctgagagctacgttcaccgtatcggaagaacaggacgtgctggtaaaacgggtctcgcg
atcacgtttgtcacttcccgcgaaatcgaccatctgcgtctgattgagcgtacgaccaag
cgtcgcatggagcgtcatgccgttccttcgatggcagaagctctggaaggtcaacaaaaa
atgacggtagacaaaatcctggaagcgtctggcagagatgatctgtctgcttacaaaaca
ttggcagaacaattgctggaggatgttgattccgtaacgttggtatccgcagcactcaag
ctgttgaccaaagagccggatacaactcctgttcgcttgacggaagaagcacctctccgt
gttgggaagaaaaagctgcctccaaaaggaaaaggtggcttcggttccggttccggtttt
ggtggaaagcgtccatctcgcccacgcaatggcgaatatcgtcctcgcggcggcgaatct
cgtccacgcagcggcgaatctcgcccacgcagcggtgaatcccgtccacgcagtggcgac
tcccgtccacgtggcgaagctcgtccaccacgcagctaa
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