Paraburkholderia fungorum: OI25_1013
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Entry
OI25_1013 CDS
T03799
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
bfn
Paraburkholderia fungorum
Pathway
bfn04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
OI25_1013 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfn03016
]
OI25_1013 (trmU)
Enzymes [BR:
bfn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
OI25_1013 (trmU)
Transfer RNA biogenesis [BR:
bfn03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
OI25_1013 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
ThiI
QueC
Arginosuc_synth
Asn_synthase
DUF7411
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
AJZ59745
UniProt:
A0AAU8T0M9
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All DBs
Position
1:1158591..1159736
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AA seq
381 aa
AA seq
DB search
MSKQKVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDSEYCSTRQDWIDVVSVA
DLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLGAET
IATGHYARVRENNGRFELLKAFDHTKDQSYFLHRLNQAQLSKTLFPLGEIPKTKVREIAE
QIALPNAKKKDSTGICFIGERPFRDFLNRYLPTKPGPMKTPDGKVIGEHIGLAFYTFGQR
KGIGLGGSKDGSGEPWFVAGKDIASNTLYVVQGHDHPWLLSHTLSAGNTSWVAGEPPAED
FACGAKTRYRQADARCSFSAAGVGEGLFELNFDAAQWAVTPGQSAVLYDGDVCLGGGIIE
HAVTGQPTVREAQQAVLLTAR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcagaaagtcgtagtaggcatgtcaggcggcgttgattcgtccgttaccgcg
tggctgctgaaggaacagggctacgacgtggtcggcctgttcatgaaaaactgggaagac
gacgatgacagcgagtactgctcgacccggcaggactggatcgacgtcgtctcggtggcg
gacctgatcggcatcgacgtcgaagcggtcaacttcgccgccgaatacaaagaccgcgtg
ttcgctgaattcctgcgcgaatactcggccggccgcacgccgaatccggacgtgctgtgc
aacgccgaaatcaagttcaaagccttcctcgatcacgccatgtcgcttggcgcggaaacc
atcgcgaccggccactatgcgcgcgtgcgtgagaacaacggccgcttcgaactgctgaag
gccttcgatcatacaaaggaccagtcgtatttcctgcatcggctaaaccaggcgcaattg
tcgaagacgctgtttccgcttggcgagattcccaagacgaaagtgcgcgagattgccgag
cagatcgcgctgccgaatgcgaagaagaaggattcgaccggcatctgctttatcggcgaa
cggccgttccgcgacttcctgaaccgctatctgccgaccaaaccgggcccgatgaaaacc
cccgacggcaaagtgatcggcgaacacatcggcctcgcgttctacacgttcgggcaacgc
aagggcatcggccttggcggcagtaaggacggcagcggcgagccgtggttcgttgccggc
aaggacattgcgtcgaatacgctgtatgtcgtccaaggccatgaccatccgtggctgctg
agccatacgttgagcgcgggcaatacgagctgggtcgcgggtgaaccgccggctgaagat
ttcgcatgcggcgcgaaaacccgctatcggcaagcggatgcgcgttgctcgttcagcgcg
gccggtgtcggcgaaggcctcttcgagctgaatttcgacgccgctcaatgggctgtcaca
ccggggcaatccgcggtgctctacgatggcgacgtgtgtctcggcggcggcatcatcgaa
cacgctgtgaccgggcaaccaaccgtgcgcgaggcgcaacaggcagtgttgctgaccgcc
cgttga
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integrated database retrieval system
