Paraburkholderia fungorum: OI25_1115
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Entry
OI25_1115 CDS
T03799
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bfn
Paraburkholderia fungorum
Pathway
bfn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OI25_1115 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfn03400
]
OI25_1115 (mutM)
Enzymes [BR:
bfn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
OI25_1115 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OI25_1115 (mutM)
DNA repair and recombination proteins [BR:
bfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OI25_1115 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
RNHCP
Motif
Other DBs
NCBI-ProteinID:
AJZ58580
UniProt:
A0AAU8TE81
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All DBs
Position
1:complement(1281375..1282205)
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AA seq
276 aa
AA seq
DB search
MPELPEVEVTRRGIEPYVSGRKVERVDVRTPALRWPIPADLAKTLRGSVVRKVERRGKYL
LFEIDAGWFIVHLGMTGTLRVLRHVPHPPAAAKHDHIDWIFDEFILRYRDPRRFGAVLWH
PREAGDVLEHPLLAGLGVEPFSPGFSGALMHRLTRGRKVSVKQALLAGEIVVGVGNIYAS
ESLFRAGIRPATAAGRVSLVRYDLLADAVRVTLAAAIEKGGSTLRDFVGSDGESGYFQLD
YFVYDRAGLPCRVCGTPIKQIVQGQRSTYFCPTCQR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttgccagaagttgaggttacccgaaggggaattgaaccgtatgtgtccggg
cgcaaggttgaacgcgtcgatgtgcgcacgcccgcgctgcgttggccgattccggcggac
cttgcgaaaaccttgcgcggcagcgtggtgcgcaaggtcgagcggcgcggtaagtatctg
ctgttcgaaatcgacgccggctggttcatagtgcatctaggcatgaccggcacgctgcgc
gtgttgcgtcatgtgccgcatcctccggctgcggcgaaacacgaccacatcgactggatt
ttcgacgaattcattttgcgctatcgcgatccacgccgtttcggcgcggtgctgtggcac
ccgcgcgaagccggcgacgtgctcgagcacccattgctcgcggggctcggggtcgagccg
ttttcgccgggtttttccggcgcgctgatgcaccggctgacgcgcggacgcaaggtatcg
gtgaagcaggcgttgctggcaggcgagatcgtggtcggggtgggcaatatctacgcatcc
gaaagcctttttcgcgccggtatccggcccgccaccgcggcgggtcgcgtctcgctcgtg
cgctacgatttgctggcggacgcggtgcgcgtcacgctcgccgccgcgatcgagaagggc
ggcagcacgctgcgcgatttcgtcggcagcgatggcgaaagcggttacttccagctcgac
tatttcgtctatgatcgcgcggggctgccatgccgtgtgtgtggaacgccgatcaaacag
atcgtgcaggggcagcgctccacgtatttttgtcccacctgccagcgctaa
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