Paraburkholderia fungorum: OI25_1134
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Entry
OI25_1134 CDS
T03799
Symbol
rpoH
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
bfn
Paraburkholderia fungorum
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfn03021
]
OI25_1134 (rpoH)
Transcription machinery [BR:
bfn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OI25_1134 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
AJZ58579
UniProt:
A0AAP1L3L7
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All DBs
Position
1:1298310..1299245
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AA seq
311 aa
AA seq
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MSHAMTLPSTLSPSSAKAASAGALALSHSSLLPGQLGNIDAYIQAVNRIPMLTPAEERQF
ATEFREQDNLESARRLVLSHLRLVVSIARNYLGYGLPHADLIQEGNIGLMKAVKRFDPEQ
NVRLVSYAMHWIKAEIHEYILRNWRMVKVATTKAQRKLFFNLRSHKQGLGAFTPDEIEGL
AQELNVKREEVAEMETRLSGGDIALEGQVEDGEESYAPIAYLADSHSEPTAVLASRQRDK
LQSDGIASALDALDARSRRIIEARWLKVEDDGSGGSTLHELADEFGVSAERIRQIEASAM
KKMRGALAEYA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgagccatgcaatgacccttccgagtactttgagcccgtcgtcggctaaggccgcttcg
gcaggtgcgctggcgctctcgcattcctcgctgctgcccggtcaactgggcaatatcgac
gcctacatccaggccgtaaatcggattccgatgctgacgccggcggaagaacgccagttc
gccaccgaatttcgcgagcaggacaaccttgagtccgcacgccgcctcgtcctgtcgcac
ctgcggctggtcgtctcgatcgcgcgcaattacctcggttatggactgccgcacgccgac
ctgatccaggaaggcaatatcggcctgatgaaggccgtaaagcgcttcgatccggagcag
aacgtacggctcgtgtcgtacgccatgcactggatcaaggctgagatccacgaatacatt
ctgcgcaactggcggatggtgaaggtcgccaccaccaaagcgcagcgcaagctgttcttc
aacctgcgcagccacaagcagggccttggcgcattcacgccggacgagatcgaaggtctc
gcccaggagcttaacgtgaagcgcgaagaagtggccgagatggaaacgcgcttgtccggc
ggcgatattgcgctggaaggtcaggtcgaagacggcgaagagtcgtacgcgccgatcgct
tacctcgccgactcgcatagcgagccgactgccgtactggcttcgcgtcagcgcgacaag
ctgcaaagcgacggtatcgcgagcgcactagatgcgctggacgcccgcagccgccggatc
atcgaagcacgctggctgaaggtggaagacgacggttcgggtggctcgacgctgcatgaa
ctggccgacgaattcggcgtatcggctgaacgtattcgccagatcgaggcgagcgcaatg
aagaaaatgcgtggcgcattagccgaatatgcgtaa
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